Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.64□□□□□ -1.35
CTDP1Q9Y5B0 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.64□□□□□ -1.35
CTDP1Q9Y5B0 MIR1273E-201ENST00000581165 102 ntBASIC6.64□□□□□ -1.35
CTDP1Q9Y5B0 AC013244.1-201ENST00000604279 193 ntBASIC6.64□□□□□ -1.35
CTDP1Q9Y5B0 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.64□□□□□ -1.35
CTDP1Q9Y5B0 AL157392.4-201ENST00000609756 345 ntBASIC6.64□□□□□ -1.35
CTDP1Q9Y5B0 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC6.64□□□□□ -1.35
CTDP1Q9Y5B0 AL035661.1-201ENST00000620459 1144 ntBASIC6.64□□□□□ -1.35
CTDP1Q9Y5B0 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.64□□□□□ -1.35
CTDP1Q9Y5B0 AL445523.1-201ENST00000451184 1362 ntBASIC6.64□□□□□ -1.35
CTDP1Q9Y5B0 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.64□□□□□ -1.35
CTDP1Q9Y5B0 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.64□□□□□ -1.35
CTDP1Q9Y5B0 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.64□□□□□ -1.35
CTDP1Q9Y5B0 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
CTDP1Q9Y5B0 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.64□□□□□ -1.35
CTDP1Q9Y5B0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CTDP1Q9Y5B0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AL121839.2-201ENST00000565058 6943 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 TCP1P3-201ENST00000414406 1498 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AL596448.1-201ENST00000415024 392 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AC015977.1-201ENST00000418887 292 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 RAB9AP5-201ENST00000437794 597 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 RAB9AP2-201ENST00000443911 597 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AL096829.2-201ENST00000446582 742 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 OR7E116P-201ENST00000448529 957 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 MEMO1P4-201ENST00000453590 386 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AL445687.2-201ENST00000458156 728 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 RPS23P2-201ENST00000463671 415 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 RPS26P39-201ENST00000469206 341 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 OR2AO1P-201ENST00000476497 403 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 RN7SL205P-201ENST00000490174 284 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AC112518.2-201ENST00000508565 425 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AC022034.1-201ENST00000512867 2156 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AC027308.1-201ENST00000517993 110 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AL358913.1-201ENST00000554342 121 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 DPPA2P4-201ENST00000563717 878 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AC145350.1-201ENST00000567426 208 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AL049844.2-201ENST00000604280 628 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 MIR1264-201ENST00000616374 69 ntBASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTDP1Q9Y5B0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 MIR16-2-201ENST00000362117 81 ntBASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 RNA5SP319-201ENST00000362768 119 ntBASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 RN7SKP162-201ENST00000363605 345 ntBASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 NPM1P37-201ENST00000403105 874 ntBASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 ZNF602P-201ENST00000405929 924 ntBASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 AP000534.2-201ENST00000412729 568 ntBASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 MTATP6P20-201ENST00000414147 562 ntBASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 AC107081.1-201ENST00000414975 361 ntBASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 NIFKP3-201ENST00000417799 865 ntBASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 AL355433.1-201ENST00000422804 300 ntBASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 NPM1P26-201ENST00000426339 738 ntBASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 RPL7P34-201ENST00000433316 712 ntBASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 AL355032.1-201ENST00000472981 438 ntBASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 AC121161.1-201ENST00000510606 652 ntBASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 RN7SKP34-201ENST00000516142 244 ntBASIC6.62□□□□□ -1.35
CTDP1Q9Y5B0 RN7SKP248-201ENST00000516278 305 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms