Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 FKBP1AP1-201ENST00000594588 318 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AL021707.7-201ENST00000607991 416 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AC037198.3-201ENST00000616754 526 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AC007275.1-201ENST00000621243 671 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
SSX2IPQ9Y2D8 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SSX2IPQ9Y2D8 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 MRE11P1-201ENST00000464884 2127 ntBASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AC092447.3-201ENST00000426027 686 ntBASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AC096775.1-201ENST00000437724 448 ntBASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AL450023.1-201ENST00000450868 751 ntBASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 RPL32P14-201ENST00000463196 378 ntBASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 RPL35AP19-201ENST00000469425 329 ntBASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AC008410.1-201ENST00000483777 339 ntBASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 WDR78-207ENST00000488333 613 ntTSL 3 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AC006499.3-201ENST00000506077 748 ntBASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 MTCO1P31-201ENST00000506355 492 ntBASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AL121594.2-201ENST00000541658 472 ntBASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AC093014.1-201ENST00000548926 724 ntBASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AC006363.1-201ENST00000603806 463 ntBASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AL022394.1-201ENST00000606979 292 ntBASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AC009974.1-201ENST00000608881 455 ntBASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AC005840.5-201ENST00000619166 599 ntBASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX2IPQ9Y2D8 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 MAPK10-338ENST00000641647 3362 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 SEPT7P7-201ENST00000420492 1301 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 MIR223-201ENST00000385204 110 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 ANAPC10P1-201ENST00000395991 556 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 AL158827.1-201ENST00000416300 391 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 GNG5P5-201ENST00000420444 220 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 ARL2BPP3-201ENST00000421226 480 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 AL606495.1-201ENST00000422100 813 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 HMGB3P5-201ENST00000428894 612 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 AL512661.1-201ENST00000434586 1253 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 RRM2P4-201ENST00000441721 562 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 RAB28P3-201ENST00000448325 597 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 ZNF736P8Y-201ENST00000451913 669 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 AC073610.1-201ENST00000489971 396 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms