Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC083862.1-201ENST00000427378 1242 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 RPL23AP30-201ENST00000432419 501 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 RPL21P110-201ENST00000433345 446 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 BSNDP4-201ENST00000436076 388 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 DDX3P2-201ENST00000446138 111 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 AP1B1P1-202ENST00000448124 191 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 PRPF38AP1-201ENST00000451976 933 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 AC013470.1-201ENST00000453438 462 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 NUTF2P4-201ENST00000458353 381 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 RN7SL65P-201ENST00000485221 315 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 RPSAP51-201ENST00000497462 645 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 AC025465.3-201ENST00000510570 311 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 LIAS-206ENST00000513731 826 ntTSL 5 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 RNA5SP287-201ENST00000516358 103 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 AP000435.1-201ENST00000528539 496 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 OR5M2P-201ENST00000529003 936 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 MIR4790-201ENST00000577799 79 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 MIR3133-201ENST00000583157 78 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 RNF138P2-201ENST00000603490 592 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 U1.22-201ENST00000605806 164 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 RN7SL840P-201ENST00000606883 284 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 RNVU1-19-201ENST00000613023 167 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 AC018558.4-201ENST00000622153 281 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 AC093909.6-201ENST00000624757 775 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 LINC02128-205ENST00000641755 1334 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 TAOK3-209ENST00000537952 2147 ntTSL 2 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AL158163.1-201ENST00000603915 1649 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 MTND5P7-201ENST00000413558 1798 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC010615.1-201ENST00000594254 1764 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AL365475.1-201ENST00000565135 1949 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC110998.1-201ENST00000519029 2053 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 RNU6-169P-201ENST00000365336 107 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 Y_RNA.482-201ENST00000384377 111 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 MIR1-2-201ENST00000384961 85 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AL139397.2-201ENST00000404529 772 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AL096800.1-201ENST00000405326 893 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 U3.34-201ENST00000408198 212 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC019097.1-201ENST00000424783 735 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC104837.2-201ENST00000427236 424 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 PCBP2P1-201ENST00000437262 977 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC011742.2-201ENST00000443818 352 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 GTF2F2P2-201ENST00000445825 721 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC105399.1-202ENST00000447303 205 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 SBDSP1-204ENST00000453858 737 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 RPL37P3-201ENST00000456825 293 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 RPS20P23-201ENST00000461683 354 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 RN7SL687P-201ENST00000480496 285 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 SNRPD2P1-201ENST00000489253 354 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 RN7SL862P-201ENST00000491550 298 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 GSTO3P-201ENST00000504733 718 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 GNPDA1-212ENST00000513454 980 ntTSL 5 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC022360.1-201ENST00000521058 340 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 SSR2-215ENST00000529008 849 ntTSL 5 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 OR7E161P-201ENST00000533722 967 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 EIF4EBP2P2-201ENST00000563883 333 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 RPL23AP77-201ENST00000588044 463 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AL022099.1-201ENST00000604551 712 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 BX664608.1-201ENST00000610519 487 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC012409.4-201ENST00000612923 249 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC099811.5-201ENST00000617211 819 ntTSL 5 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 RN7SL113P-201ENST00000619959 299 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 471.5 ms