Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
CUEDC1Q9NWM3 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 RBMX2P2-201ENST00000257020 946 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 RN7SKP63-201ENST00000363187 301 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 Y_RNA.146-201ENST00000363549 102 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 Y_RNA.474-201ENST00000384341 102 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 HMGB3P18-201ENST00000406327 590 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AL354719.1-201ENST00000406535 843 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 RN7SKP131-201ENST00000410698 301 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 RN7SKP140-201ENST00000411196 284 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC093698.1-201ENST00000423843 571 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 SDCBPP2-201ENST00000424643 885 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 HMGB1P45-201ENST00000435986 653 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 RPL29P7-201ENST00000440227 457 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 GAPDHP39-201ENST00000481866 979 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AF305872.1-201ENST00000485217 471 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 KCTD9P5-201ENST00000504141 1170 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC093325.1-201ENST00000508378 326 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AP003034.1-201ENST00000534621 422 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC243972.3-201ENST00000539655 198 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC008055.1-201ENST00000547032 609 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC044860.3-201ENST00000559957 368 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC138749.2-201ENST00000566048 167 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 MIR4503-201ENST00000582187 83 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 MIR548Y-201ENST00000582739 110 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC018638.8-201ENST00000588755 281 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC243960.4-201ENST00000600532 288 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AL355598.1-201ENST00000604169 202 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AL022238.3-201ENST00000609279 443 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC090527.3-201ENST00000619041 548 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC025162.2-201ENST00000619602 560 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC090971.5-201ENST00000621102 293 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC007342.8-201ENST00000623278 678 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC099667.1-201ENST00000624222 469 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AP000550.3-201ENST00000637734 379 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 AC006213.6-201ENST00000623722 4179 ntBASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.21□□□□□ -1.26
CUEDC1Q9NWM3 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 Y_RNA.1-201ENST00000352915 104 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 OR10D1P-201ENST00000355343 936 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 ARMCX7P-201ENST00000372828 562 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 SNORA51.7-201ENST00000384171 134 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC211486.3-201ENST00000412694 621 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AL022100.1-202ENST00000421214 548 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 RPS27AP14-201ENST00000422868 454 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC002069.1-201ENST00000429649 1159 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms