Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 NEAT1-202ENST00000501122 22743 ntBASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 RNA5SP319-201ENST00000362768 119 ntBASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 RNU4-44P-201ENST00000363050 141 ntBASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 RNU6-1263P-201ENST00000384601 106 ntBASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 AL596448.1-201ENST00000415024 392 ntBASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 AC096644.3-201ENST00000416788 338 ntBASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 EIF4A1P1-201ENST00000420241 934 ntBASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 NFYAP1-201ENST00000431953 972 ntBASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 MTATP6P1-201ENST00000514057 681 ntBASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 AC097505.1-201ENST00000610199 565 ntBASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 AL118522.2-201ENST00000616045 615 ntBASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 AC126175.1-201ENST00000617041 758 ntBASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 AC126323.6-202ENST00000568092 3511 ntBASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCNB1IP1Q9NPC3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AC139713.2-215ENST00000641428 5037 ntBASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AC013429.2-201ENST00000418798 781 ntBASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 NAP1L4P2-201ENST00000425958 899 ntBASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 THAP12P8-201ENST00000447914 2115 ntBASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 MTND6P32-201ENST00000457611 483 ntBASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AC117394.1-201ENST00000477323 567 ntBASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AC090686.1-201ENST00000481577 749 ntBASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AP001960.1-201ENST00000506494 658 ntBASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AC027308.1-201ENST00000517993 110 ntBASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AC015720.2-201ENST00000567709 334 ntBASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AL137072.1-201ENST00000603444 466 ntBASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AC009597.2-201ENST00000604659 592 ntBASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AC011626.1-201ENST00000604710 562 ntBASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 AC063976.2-201ENST00000425667 3556 ntBASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.8□□□□□ -1.64
CCNB1IP1Q9NPC3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CCNB1IP1Q9NPC3 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCNB1IP1Q9NPC3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CCNB1IP1Q9NPC3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCNB1IP1Q9NPC3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCNB1IP1Q9NPC3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCNB1IP1Q9NPC3 AL353625.1-202ENST00000366273 571 ntBASIC4.79□□□□□ -1.64
CCNB1IP1Q9NPC3 SNORA17A-201ENST00000391185 133 ntBASIC4.79□□□□□ -1.64
CCNB1IP1Q9NPC3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCNB1IP1Q9NPC3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.79□□□□□ -1.64
CCNB1IP1Q9NPC3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.79□□□□□ -1.64
CCNB1IP1Q9NPC3 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.79□□□□□ -1.64
CCNB1IP1Q9NPC3 HMGB3P10-201ENST00000434734 572 ntBASIC4.79□□□□□ -1.64
CCNB1IP1Q9NPC3 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.79□□□□□ -1.64
CCNB1IP1Q9NPC3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.79□□□□□ -1.64
CCNB1IP1Q9NPC3 RPL12P11-201ENST00000439970 501 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms