Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 ATP5LP5-201ENST00000483050 299 ntBASIC4.72□□□□□ -1.65
CHD8Q9HCK8 SNORA31.9-201ENST00000516429 84 ntBASIC4.72□□□□□ -1.65
CHD8Q9HCK8 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 AC007346.2-201ENST00000564816 892 ntBASIC4.72□□□□□ -1.65
CHD8Q9HCK8 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 RAD17P1-201ENST00000418130 2042 ntBASIC4.72□□□□□ -1.65
CHD8Q9HCK8 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 OR13Z1P-201ENST00000416141 834 ntBASIC4.72□□□□□ -1.65
CHD8Q9HCK8 AC098799.1-201ENST00000504752 800 ntBASIC4.72□□□□□ -1.65
CHD8Q9HCK8 AC091912.1-201ENST00000511351 248 ntBASIC4.72□□□□□ -1.65
CHD8Q9HCK8 AC244502.2-201ENST00000543361 851 ntBASIC4.72□□□□□ -1.65
CHD8Q9HCK8 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 MIR4420-201ENST00000583944 77 ntBASIC4.72□□□□□ -1.65
CHD8Q9HCK8 AC115286.1-201ENST00000604298 434 ntBASIC4.72□□□□□ -1.65
CHD8Q9HCK8 AC004076.2-201ENST00000620532 3323 ntBASIC4.72□□□□□ -1.65
CHD8Q9HCK8 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 UGT2B26P-201ENST00000508672 1613 ntBASIC4.72□□□□□ -1.65
CHD8Q9HCK8 SCARNA15-201ENST00000607520 4325 ntBASIC4.72□□□□□ -1.65
CHD8Q9HCK8 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.71□□□□□ -1.65
CHD8Q9HCK8 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CHD8Q9HCK8 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.65
CHD8Q9HCK8 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.71□□□□□ -1.65
CHD8Q9HCK8 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.71□□□□□ -1.65
CHD8Q9HCK8 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC4.71□□□□□ -1.65
CHD8Q9HCK8 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.71□□□□□ -1.65
CHD8Q9HCK8 CYCSP32-201ENST00000440548 321 ntBASIC4.71□□□□□ -1.65
CHD8Q9HCK8 RRM2P4-201ENST00000441721 562 ntBASIC4.71□□□□□ -1.65
CHD8Q9HCK8 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CHD8Q9HCK8 AC027309.2-201ENST00000520566 192 ntBASIC4.71□□□□□ -1.65
CHD8Q9HCK8 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.71□□□□□ -1.65
CHD8Q9HCK8 MIR3138-201ENST00000585238 82 ntBASIC4.71□□□□□ -1.65
CHD8Q9HCK8 MIMT1-201ENST00000597105 1050 ntBASIC4.71□□□□□ -1.65
CHD8Q9HCK8 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.71□□□□□ -1.65
CHD8Q9HCK8 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CHD8Q9HCK8 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.65
CHD8Q9HCK8 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 PTMAP5-201ENST00000393073 333 ntBASIC4.71□□□□□ -1.66
CHD8Q9HCK8 Z97832.1-201ENST00000402490 328 ntBASIC4.71□□□□□ -1.66
CHD8Q9HCK8 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 KCTD9P4-201ENST00000526766 1166 ntBASIC4.71□□□□□ -1.66
CHD8Q9HCK8 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 AL356121.2-201ENST00000624715 780 ntBASIC4.71□□□□□ -1.66
CHD8Q9HCK8 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC4.71□□□□□ -1.66
CHD8Q9HCK8 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 RPL23AP17-201ENST00000401064 499 ntBASIC4.7□□□□□ -1.66
CHD8Q9HCK8 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 SCARNA10-201ENST00000459255 330 ntBASIC4.7□□□□□ -1.66
CHD8Q9HCK8 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 AC008814.1-201ENST00000603797 406 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms