Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 OR13C1P-202ENST00000641378 2919 ntBASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 OR52B3P-201ENST00000314715 928 ntBASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 RNA5SP28-201ENST00000363841 119 ntBASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 AL139039.2-201ENST00000407436 479 ntBASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 TMBIM7P-201ENST00000418074 855 ntBASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 ARAFP2-201ENST00000440565 559 ntBASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 AC118758.1-202ENST00000454719 225 ntBASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 AP002371.1-201ENST00000463604 433 ntBASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 RPL23AP37-201ENST00000479658 549 ntBASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 TRIM77BP-201ENST00000524985 1119 ntBASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 AC079600.1-201ENST00000550326 297 ntBASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 AL358913.1-201ENST00000554342 121 ntBASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 AC084759.1-201ENST00000561168 290 ntBASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 AC138207.8-204ENST00000579588 527 ntBASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 BNIP3P35-201ENST00000604530 490 ntBASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 AL591926.1-201ENST00000620542 217 ntBASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 MIR6813-201ENST00000621638 56 ntBASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC28BQ9BUN5 ACTR3BP5-201ENST00000448440 1479 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 MIR133B-201ENST00000362210 119 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 OR4K12P-201ENST00000406538 961 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 RPL21P108-201ENST00000413857 481 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 BMS1P17-202ENST00000416720 316 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 RPL34P3-201ENST00000421454 338 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 NPM1P48-201ENST00000436002 853 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 AC007386.1-201ENST00000455212 582 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 RN7SL441P-201ENST00000492388 296 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 CCNHP1-201ENST00000513311 678 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 RNA5SP249-201ENST00000516127 99 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 CYCSP22-201ENST00000517555 339 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 EIF4A2P5-201ENST00000529914 499 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 GLRXP2-201ENST00000555594 321 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 AC135626.1-201ENST00000556983 435 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 NDUFB4P11-201ENST00000560510 395 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 CCDC58P1-201ENST00000578567 430 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 CU639417.4-201ENST00000623928 207 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms