Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 TTC41P-205ENST00000551270 3963 ntBASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CSMD1Q96PZ7 NCLP2-201ENST00000416078 1462 ntBASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 PPIAP9-201ENST00000403866 498 ntBASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 AL356863.1-201ENST00000623378 1080 ntBASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 AC012442.3-202ENST00000636742 206 ntBASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 AC093297.3-201ENST00000607056 2517 ntBASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CSMD1Q96PZ7 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 CRIP1P1-201ENST00000427567 185 ntBASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 AC108475.1-201ENST00000507880 950 ntBASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 AC098976.1-201ENST00000513014 541 ntBASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 AC010547.7-201ENST00000570323 333 ntBASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 EIF1P5-201ENST00000585002 234 ntBASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 RN7SL814P-201ENST00000487715 300 ntBASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 RNU2-30P-201ENST00000516209 141 ntBASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 RN7SL802P-201ENST00000577858 299 ntBASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 AC015712.7-201ENST00000615211 635 ntBASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 AC092647.1-201ENST00000420654 287 ntBASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 AC124944.2-201ENST00000429866 1242 ntBASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 AGGF1P6-201ENST00000569213 976 ntBASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CSMD1Q96PZ7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 ZNF402P-201ENST00000404435 3100 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 FAM91A3P-201ENST00000456826 2544 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 FABP7P1-201ENST00000424004 391 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 HMGN1P9-201ENST00000515212 298 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AC010476.1-201ENST00000519111 851 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 MIR554-201ENST00000384874 96 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 AL022722.2-201ENST00000402519 180 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 RPL37P1-201ENST00000432310 284 ntBASIC4.07□□□□□ -1.76
CSMD1Q96PZ7 RRM2P4-201ENST00000441721 562 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms