Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 RNA5SP90-201ENST00000364801 99 ntBASIC5.24□□□□□ -1.57
C9orf72Q96LT7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 SNORA67-201ENST00000384423 137 ntBASIC5.24□□□□□ -1.57
C9orf72Q96LT7 OR8V1P-201ENST00000395193 873 ntBASIC5.24□□□□□ -1.57
C9orf72Q96LT7 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 AC108075.1-201ENST00000424692 529 ntBASIC5.24□□□□□ -1.57
C9orf72Q96LT7 PTMAP6-201ENST00000439110 327 ntBASIC5.24□□□□□ -1.57
C9orf72Q96LT7 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 FAR2P1-206ENST00000449736 709 ntBASIC5.24□□□□□ -1.57
C9orf72Q96LT7 AURKAPS1-201ENST00000451805 1212 ntBASIC5.24□□□□□ -1.57
C9orf72Q96LT7 RN7SL222P-201ENST00000476452 299 ntBASIC5.24□□□□□ -1.57
C9orf72Q96LT7 AC097173.1-201ENST00000505862 819 ntBASIC5.24□□□□□ -1.57
C9orf72Q96LT7 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 RPL10P14-201ENST00000565265 298 ntBASIC5.24□□□□□ -1.57
C9orf72Q96LT7 AC074101.1-201ENST00000637861 241 ntBASIC5.24□□□□□ -1.57
C9orf72Q96LT7 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.24□□□□□ -1.57
C9orf72Q96LT7 AC092747.4-201ENST00000620519 1861 ntBASIC5.24□□□□□ -1.57
C9orf72Q96LT7 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 SNORA58B-201ENST00000364259 136 ntBASIC5.23□□□□□ -1.57
C9orf72Q96LT7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 AC013442.1-201ENST00000397347 228 ntBASIC5.23□□□□□ -1.57
C9orf72Q96LT7 RNU6-233P-201ENST00000410845 141 ntBASIC5.23□□□□□ -1.57
C9orf72Q96LT7 RN7SKP273-201ENST00000411392 314 ntBASIC5.23□□□□□ -1.57
C9orf72Q96LT7 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 RPS11P7-201ENST00000442125 465 ntBASIC5.23□□□□□ -1.57
C9orf72Q96LT7 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 AC020779.1-201ENST00000478757 796 ntBASIC5.23□□□□□ -1.57
C9orf72Q96LT7 RPL32P9-201ENST00000487963 407 ntBASIC5.23□□□□□ -1.57
C9orf72Q96LT7 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 AC126915.2-201ENST00000610957 190 ntBASIC5.23□□□□□ -1.57
C9orf72Q96LT7 AL121612.2-201ENST00000612261 482 ntBASIC5.23□□□□□ -1.57
C9orf72Q96LT7 AL122125.1-201ENST00000616999 600 ntBASIC5.23□□□□□ -1.57
C9orf72Q96LT7 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 AC015914.2-201ENST00000618167 288 ntBASIC5.23□□□□□ -1.57
C9orf72Q96LT7 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 CASC19-255ENST00000641733 1385 ntBASIC5.23□□□□□ -1.57
C9orf72Q96LT7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 STX3-208ENST00000641815 3236 ntBASIC5.23□□□□□ -1.57
C9orf72Q96LT7 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf72Q96LT7 AL022322.2-201ENST00000624072 20397 ntBASIC5.22□□□□□ -1.57
C9orf72Q96LT7 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.22□□□□□ -1.57
C9orf72Q96LT7 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 MTHFD2P5-201ENST00000320415 844 ntBASIC5.22□□□□□ -1.57
C9orf72Q96LT7 AC002524.1-201ENST00000411687 547 ntBASIC5.22□□□□□ -1.57
C9orf72Q96LT7 AC007394.1-201ENST00000421941 531 ntBASIC5.22□□□□□ -1.57
C9orf72Q96LT7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 AL356981.1-201ENST00000454879 684 ntBASIC5.22□□□□□ -1.57
C9orf72Q96LT7 AC091180.1-201ENST00000462104 372 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms