Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC087392.3-202ENST00000358446 1754 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC009948.3-201ENST00000603415 1798 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 ATP5BP1-201ENST00000411980 1574 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC079097.1-201ENST00000512187 1399 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 RN7SKP107-201ENST00000364157 290 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 RN7SKP237-201ENST00000364663 301 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 RNU6-253P-201ENST00000384730 105 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AL035419.1-201ENST00000397037 564 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 RNA5SP431-201ENST00000410312 120 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 RANP4-201ENST00000413361 655 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC009237.2-201ENST00000421358 284 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC008072.1-201ENST00000434254 824 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 HMGN1P2-201ENST00000445197 310 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 SEPT14P24-201ENST00000447236 180 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 FGF7P3-201ENST00000454645 303 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 RN7SL221P-201ENST00000466190 281 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AF213884.1-201ENST00000488102 463 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC018797.1-201ENST00000510791 255 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC133963.2-201ENST00000513686 578 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 RNU6-1046P-201ENST00000516538 107 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AF235103.2-201ENST00000525753 346 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 EEF1A1P17-201ENST00000547505 1275 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC078814.3-201ENST00000553036 491 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC012603.1-201ENST00000606424 528 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC063962.1-201ENST00000608199 521 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AL132765.2-201ENST00000610812 351 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AP001506.1-201ENST00000615444 211 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC139769.3-201ENST00000618383 175 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 YWHAEP7-203ENST00000622054 312 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 PFKM-232ENST00000629846 381 ntTSL 4 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 KARSP2-201ENST00000415696 1639 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC087565.3-202ENST00000642085 1603 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
TRIM47Q96LD4 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
TRIM47Q96LD4 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.12
TRIM47Q96LD4 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 MTND5P3-201ENST00000438536 1800 ntBASIC8.02□□□□□ -1.13
TRIM47Q96LD4 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 Y_RNA.422-201ENST00000384054 114 ntBASIC8.02□□□□□ -1.13
TRIM47Q96LD4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 ATF1P1-201ENST00000406040 927 ntBASIC8.02□□□□□ -1.13
TRIM47Q96LD4 AL139805.1-201ENST00000407837 289 ntBASIC8.02□□□□□ -1.13
TRIM47Q96LD4 RN7SKP240-201ENST00000410583 375 ntBASIC8.02□□□□□ -1.13
TRIM47Q96LD4 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 NPM1P18-201ENST00000434232 732 ntBASIC8.02□□□□□ -1.13
TRIM47Q96LD4 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 BRK1P2-201ENST00000442875 223 ntBASIC8.02□□□□□ -1.13
TRIM47Q96LD4 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 RPL7P32-201ENST00000457119 744 ntBASIC8.02□□□□□ -1.13
TRIM47Q96LD4 CEACAMP4-201ENST00000457676 421 ntBASIC8.02□□□□□ -1.13
TRIM47Q96LD4 RPL34P34-201ENST00000465389 354 ntBASIC8.02□□□□□ -1.13
TRIM47Q96LD4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC8.02□□□□□ -1.13
TRIM47Q96LD4 RN7SL88P-201ENST00000480166 299 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms