Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF31Q96EP0 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF31Q96EP0 AC112255.1-201ENST00000624070 2493 ntBASIC5.75□□□□□ -1.49
RNF31Q96EP0 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF31Q96EP0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF31Q96EP0 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF31Q96EP0 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF31Q96EP0 AC018809.2-201ENST00000602436 3823 ntBASIC5.75□□□□□ -1.49
RNF31Q96EP0 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
RNF31Q96EP0 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
RNF31Q96EP0 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF31Q96EP0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RNF31Q96EP0 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF31Q96EP0 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF31Q96EP0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF31Q96EP0 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF31Q96EP0 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF31Q96EP0 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF31Q96EP0 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF31Q96EP0 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF31Q96EP0 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 RNU6-636P-201ENST00000384598 107 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 RNU11-201ENST00000387069 134 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 AL021331.1-201ENST00000402817 582 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 ATF1P1-201ENST00000406040 927 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 RPS3AP37-201ENST00000419176 745 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 GLUD1P9-201ENST00000420997 1173 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 AC092651.1-201ENST00000426110 312 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 ATP5C1P1-201ENST00000441945 895 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF31Q96EP0 AL161722.1-201ENST00000446972 1032 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 AC016027.4-201ENST00000450866 277 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 AC112187.1-201ENST00000455837 479 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 AC093166.4-201ENST00000457867 318 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 RNA5SP362-201ENST00000516048 118 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 AC006530.1-201ENST00000555980 571 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 MIR4489-201ENST00000578869 62 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 AC015802.2-201ENST00000589690 189 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF31Q96EP0 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF31Q96EP0 AL360012.1-201ENST00000602813 131 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 AL360219.1-201ENST00000610230 366 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 AP002782.1-201ENST00000623107 614 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF31Q96EP0 ZNF876P-202ENST00000398732 1485 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF31Q96EP0 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF31Q96EP0 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF31Q96EP0 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF31Q96EP0 HSPD1P11-201ENST00000508643 1702 ntBASIC5.74□□□□□ -1.49
RNF31Q96EP0 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF31Q96EP0 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF31Q96EP0 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC020656.2-201ENST00000613291 5309 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC026523.2-201ENST00000625039 7739 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF31Q96EP0 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF31Q96EP0 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RNF31Q96EP0 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC232271.1-201ENST00000602455 2715 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 AL121768.1-201ENST00000613917 2544 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF31Q96EP0 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF31Q96EP0 RNU6-1214P-201ENST00000363650 109 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 RN7SKP292-201ENST00000365522 317 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 SNORD65-201ENST00000391079 73 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 RNU2-17P-201ENST00000410290 190 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 AL356968.2-201ENST00000412769 1257 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 CYP4F30P-202ENST00000420048 405 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 BX284632.2-201ENST00000421091 399 ntBASIC5.73□□□□□ -1.49
RNF31Q96EP0 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF31Q96EP0 AC126120.1-201ENST00000431082 470 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms