Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 AL353625.1-202ENST00000366273 571 ntBASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 AL109941.1-201ENST00000401925 229 ntBASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 RNU2-22P-201ENST00000411266 212 ntBASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 HYALP1-201ENST00000417674 1279 ntBASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 AC093162.1-201ENST00000419682 124 ntBASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 AC007394.1-201ENST00000421941 531 ntBASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 RPL5P25-201ENST00000441148 775 ntBASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 AC092647.3-201ENST00000443044 633 ntBASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 RPL32P9-201ENST00000487963 407 ntBASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 RNA5SP43-201ENST00000516559 110 ntBASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 AL512310.9-201ENST00000553311 948 ntBASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 AC009852.2-201ENST00000567898 485 ntBASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 AC092944.2-201ENST00000605443 889 ntBASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 AC092111.2-201ENST00000611627 1414 ntBASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 MTCO1P46-201ENST00000451639 1491 ntBASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.11□□□□□ -1.59
ECHDC3Q96DC8 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 AP005435.3-201ENST00000531260 3198 ntBASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 CHMP1B2P-201ENST00000399581 597 ntBASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 SNORA77-201ENST00000408716 125 ntBASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 GJA6P-201ENST00000415117 1042 ntBASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 COX6CP13-201ENST00000428703 226 ntBASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 RPS29P9-201ENST00000440360 171 ntBASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 RPL7AP61-201ENST00000443410 636 ntBASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 OR7E125P-201ENST00000443450 846 ntBASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 AC093270.2-201ENST00000486157 792 ntBASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 MORF4L2P1-201ENST00000503761 858 ntBASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 AC111000.5-201ENST00000506559 1178 ntBASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 AC110775.1-201ENST00000513721 462 ntBASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 PRPF19P1-201ENST00000584766 898 ntBASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 AC112694.2-201ENST00000623697 768 ntBASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 CASC19-222ENST00000641321 1173 ntBASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 AC007996.1-201ENST00000620414 2821 ntBASIC5.1□□□□□ -1.59
ECHDC3Q96DC8 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ECHDC3Q96DC8 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ECHDC3Q96DC8 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.09□□□□□ -1.59
ECHDC3Q96DC8 SAMMSON-213ENST00000641336 1521 ntBASIC5.09□□□□□ -1.59
ECHDC3Q96DC8 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.09□□□□□ -1.59
ECHDC3Q96DC8 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
ECHDC3Q96DC8 RN7SKP104-201ENST00000362605 328 ntBASIC5.09□□□□□ -1.59
ECHDC3Q96DC8 RNA5SP428-201ENST00000365129 132 ntBASIC5.09□□□□□ -1.59
ECHDC3Q96DC8 ATP5HP3-201ENST00000396994 486 ntBASIC5.09□□□□□ -1.59
ECHDC3Q96DC8 U3.32-201ENST00000408116 212 ntBASIC5.09□□□□□ -1.59
ECHDC3Q96DC8 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.09□□□□□ -1.59
ECHDC3Q96DC8 IGHV5-78-201ENST00000450948 295 ntBASIC5.09□□□□□ -1.59
ECHDC3Q96DC8 RPL5P22-201ENST00000480199 884 ntBASIC5.09□□□□□ -1.59
ECHDC3Q96DC8 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.09□□□□□ -1.59
ECHDC3Q96DC8 RN7SL97P-201ENST00000486780 299 ntBASIC5.09□□□□□ -1.59
ECHDC3Q96DC8 NDUFA5P12-201ENST00000503796 343 ntBASIC5.09□□□□□ -1.59
ECHDC3Q96DC8 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.09□□□□□ -1.59
ECHDC3Q96DC8 RN7SKP5-201ENST00000517045 272 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms