Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 RPS26P41-201ENST00000450370 284 ntBASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 AC016724.1-201ENST00000453215 421 ntBASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 AC005412.2-201ENST00000492004 341 ntBASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 AC106872.4-201ENST00000510050 523 ntBASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 RNA5SP249-201ENST00000516127 99 ntBASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 AC027308.1-201ENST00000517993 110 ntBASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 AC022106.2-201ENST00000620114 757 ntBASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 AC136428.4-201ENST00000634254 1155 ntBASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 CASC19-221ENST00000641309 1382 ntBASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 AC126323.6-202ENST00000568092 3511 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 AC092747.4-201ENST00000620519 1861 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 RN7SKP206-201ENST00000410823 293 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 NPM1P4-201ENST00000414095 812 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 AC093655.2-201ENST00000425735 631 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 RPL7L1P9-201ENST00000431298 745 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 RPL7AP61-201ENST00000443410 636 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 AC004980.3-201ENST00000447046 365 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 AL356981.1-201ENST00000454879 684 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 RPL7P6-201ENST00000480903 738 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 RPL7P39-201ENST00000481157 744 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 AC073358.1-201ENST00000505671 684 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 AC097173.1-201ENST00000505862 819 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 RNA5SP373-201ENST00000517271 95 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 RPL23AP53-201ENST00000521854 457 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 IGKV2-18-201ENST00000522607 343 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 OR10D4P-201ENST00000525892 951 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 AL049779.2-201ENST00000553847 315 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 FKBP1AP1-201ENST00000594588 318 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 AC069307.1-201ENST00000602820 447 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 AL139407.1-201ENST00000613826 1175 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 CYP4F35P-202ENST00000636121 390 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 CASC19-264ENST00000641912 1184 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 SOCS5P3-201ENST00000425115 1576 ntBASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RTN4IP1Q8WWV3 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.25□□□□□ -1.73
RTN4IP1Q8WWV3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RTN4IP1Q8WWV3 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.25□□□□□ -1.73
RTN4IP1Q8WWV3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RTN4IP1Q8WWV3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.25□□□□□ -1.73
RTN4IP1Q8WWV3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RTN4IP1Q8WWV3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.25□□□□□ -1.73
RTN4IP1Q8WWV3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RTN4IP1Q8WWV3 MTHFD2P5-201ENST00000320415 844 ntBASIC4.25□□□□□ -1.73
RTN4IP1Q8WWV3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RTN4IP1Q8WWV3 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RTN4IP1Q8WWV3 RNA5SP183-201ENST00000362452 119 ntBASIC4.25□□□□□ -1.73
RTN4IP1Q8WWV3 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.25□□□□□ -1.73
RTN4IP1Q8WWV3 RN7SKP125-201ENST00000410481 302 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms