Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.08□□□□□ -1.44
SNED1Q8TER0 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SNED1Q8TER0 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SNED1Q8TER0 RN7SKP106-201ENST00000410832 272 ntBASIC6.08□□□□□ -1.44
SNED1Q8TER0 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.08□□□□□ -1.44
SNED1Q8TER0 AL645608.4-201ENST00000423619 154 ntBASIC6.08□□□□□ -1.44
SNED1Q8TER0 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.08□□□□□ -1.44
SNED1Q8TER0 RPL7AP49-201ENST00000429522 581 ntBASIC6.08□□□□□ -1.44
SNED1Q8TER0 AL591438.1-201ENST00000433508 581 ntBASIC6.08□□□□□ -1.44
SNED1Q8TER0 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.08□□□□□ -1.44
SNED1Q8TER0 RPL7AP61-201ENST00000443410 636 ntBASIC6.08□□□□□ -1.44
SNED1Q8TER0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.08□□□□□ -1.44
SNED1Q8TER0 RPSAP51-201ENST00000497462 645 ntBASIC6.08□□□□□ -1.44
SNED1Q8TER0 RN7SKP92-201ENST00000517266 244 ntBASIC6.08□□□□□ -1.44
SNED1Q8TER0 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.08□□□□□ -1.44
SNED1Q8TER0 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.08□□□□□ -1.44
SNED1Q8TER0 AL137058.3-201ENST00000624531 3099 ntBASIC6.07□□□□□ -1.44
SNED1Q8TER0 AL592148.3-201ENST00000608771 2646 ntBASIC6.07□□□□□ -1.44
SNED1Q8TER0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNED1Q8TER0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNED1Q8TER0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SNED1Q8TER0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNED1Q8TER0 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.07□□□□□ -1.44
SNED1Q8TER0 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SNED1Q8TER0 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNED1Q8TER0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.07□□□□□ -1.44
SNED1Q8TER0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SNED1Q8TER0 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SNED1Q8TER0 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SNED1Q8TER0 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.07□□□□□ -1.44
SNED1Q8TER0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNED1Q8TER0 FABP7P1-201ENST00000424004 391 ntBASIC6.07□□□□□ -1.44
SNED1Q8TER0 RPL19P16-201ENST00000433839 588 ntBASIC6.07□□□□□ -1.44
SNED1Q8TER0 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.07□□□□□ -1.44
SNED1Q8TER0 AL136455.1-201ENST00000441083 1240 ntBASIC6.07□□□□□ -1.44
SNED1Q8TER0 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.07□□□□□ -1.44
SNED1Q8TER0 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.07□□□□□ -1.44
SNED1Q8TER0 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.07□□□□□ -1.44
SNED1Q8TER0 AC083829.1-201ENST00000503756 657 ntBASIC6.07□□□□□ -1.44
SNED1Q8TER0 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.07□□□□□ -1.44
SNED1Q8TER0 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.07□□□□□ -1.44
SNED1Q8TER0 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.07□□□□□ -1.44
SNED1Q8TER0 ENPP7P9-201ENST00000514456 627 ntBASIC6.07□□□□□ -1.44
SNED1Q8TER0 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC6.07□□□□□ -1.44
SNED1Q8TER0 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.07□□□□□ -1.44
SNED1Q8TER0 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.07□□□□□ -1.44
SNED1Q8TER0 RN7SL290P-201ENST00000578661 300 ntBASIC6.07□□□□□ -1.44
SNED1Q8TER0 AC006338.2-201ENST00000616864 791 ntBASIC6.07□□□□□ -1.44
SNED1Q8TER0 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNED1Q8TER0 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.07□□□□□ -1.44
SNED1Q8TER0 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNED1Q8TER0 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNED1Q8TER0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNED1Q8TER0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNED1Q8TER0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNED1Q8TER0 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNED1Q8TER0 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.06□□□□□ -1.44
SNED1Q8TER0 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SNED1Q8TER0 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNED1Q8TER0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
SNED1Q8TER0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNED1Q8TER0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNED1Q8TER0 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNED1Q8TER0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNED1Q8TER0 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.06□□□□□ -1.44
SNED1Q8TER0 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SNED1Q8TER0 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.06□□□□□ -1.44
SNED1Q8TER0 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNED1Q8TER0 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNED1Q8TER0 SNORD113.2-201ENST00000364166 89 ntBASIC6.06□□□□□ -1.44
SNED1Q8TER0 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.06□□□□□ -1.44
SNED1Q8TER0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SNED1Q8TER0 MIR298-201ENST00000401212 88 ntBASIC6.06□□□□□ -1.44
SNED1Q8TER0 RPEP3-201ENST00000425462 676 ntBASIC6.06□□□□□ -1.44
SNED1Q8TER0 AC009238.2-201ENST00000431026 355 ntBASIC6.06□□□□□ -1.44
SNED1Q8TER0 AC016772.1-201ENST00000444170 1261 ntBASIC6.06□□□□□ -1.44
SNED1Q8TER0 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.06□□□□□ -1.44
SNED1Q8TER0 RN7SL441P-201ENST00000492388 296 ntBASIC6.06□□□□□ -1.44
SNED1Q8TER0 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.06□□□□□ -1.44
SNED1Q8TER0 MIR3908-201ENST00000579798 126 ntBASIC6.06□□□□□ -1.44
SNED1Q8TER0 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNED1Q8TER0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.06□□□□□ -1.44
SNED1Q8TER0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNED1Q8TER0 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNED1Q8TER0 AC091046.3-201ENST00000631455 1574 ntBASIC6.06□□□□□ -1.44
SNED1Q8TER0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
SNED1Q8TER0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.05□□□□□ -1.44
SNED1Q8TER0 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNED1Q8TER0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNED1Q8TER0 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNED1Q8TER0 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNED1Q8TER0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SNED1Q8TER0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SNED1Q8TER0 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.05□□□□□ -1.44
SNED1Q8TER0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNED1Q8TER0 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNED1Q8TER0 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SNED1Q8TER0 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNED1Q8TER0 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNED1Q8TER0 RNA5SP447-201ENST00000363749 119 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms