Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 RNA5SP90-201ENST00000364801 99 ntBASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 RNU1-74P-201ENST00000384108 171 ntBASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 AL512430.2-201ENST00000406786 339 ntBASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 U3.32-201ENST00000408116 212 ntBASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 FAM96AP1-201ENST00000430879 482 ntBASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 AL161722.2-201ENST00000434731 981 ntBASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 RPS29P10-201ENST00000439197 166 ntBASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 RPS26P41-201ENST00000450370 284 ntBASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 RPL21P6-201ENST00000479171 504 ntBASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 RN7SL809P-201ENST00000482040 297 ntBASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 SULT1C2P2-201ENST00000562517 294 ntBASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 AC109309.2-201ENST00000612597 332 ntBASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 AC108359.1-201ENST00000616451 1211 ntBASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 SAMMSON-209ENST00000641222 1100 ntBASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.94□□□□□ -1.62
CLHC1Q8NHS4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 OR8V1P-201ENST00000395193 873 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 AL391422.1-201ENST00000402155 436 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 RN7SKP97-201ENST00000410966 333 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 RPL35AP24-201ENST00000413846 330 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 RPS11P7-201ENST00000442125 465 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 PPIAP19-201ENST00000486414 492 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 RN7SL184P-201ENST00000488308 297 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 MTATP6P1-201ENST00000514057 681 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 AC126177.5-201ENST00000549599 178 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 AL121839.1-201ENST00000556233 1185 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 SNORD95-201ENST00000579879 68 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 MIR3614-201ENST00000581261 86 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 MIR3936-201ENST00000584304 110 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 AC023813.4-201ENST00000607580 580 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 AC004477.3-201ENST00000614061 590 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 AL359513.1-201ENST00000614364 557 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 MIR6861-201ENST00000618657 64 ntBASIC4.93□□□□□ -1.62
CLHC1Q8NHS4 SAMMSON-227ENST00000642114 1199 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms