Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL672167.2-201ENST00000377164 879 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 RPL5P20-201ENST00000403848 896 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 BTF3P7-201ENST00000407097 488 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AL353133.1-201ENST00000407695 401 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 RNU6-575P-201ENST00000411326 105 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 RPS15AP38-201ENST00000413110 372 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 VTA1P1-201ENST00000414044 866 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC083855.1-201ENST00000440041 258 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 EEF1E1P1-201ENST00000446998 430 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AL591363.1-201ENST00000450091 483 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 RN7SL655P-201ENST00000486087 298 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC006499.5-201ENST00000505037 514 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC131392.1-201ENST00000506490 633 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 KRT19P6-201ENST00000510983 209 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 SCARNA5-201ENST00000516201 276 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 RN7SKP244-201ENST00000516513 307 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC109635.3-201ENST00000529536 185 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AP004247.1-201ENST00000531556 1289 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 MIR4301-201ENST00000577203 66 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 PPIAP14-201ENST00000577627 496 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 MIR4666A-201ENST00000580160 79 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC090517.2-201ENST00000614966 680 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AL357080.1-201ENST00000617394 239 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 U1.41-201ENST00000617626 165 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC072046.2-201ENST00000618366 268 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC005840.5-201ENST00000619166 599 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC005899.6-201ENST00000620729 297 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AL356596.1-201ENST00000624230 379 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AL132640.3-201ENST00000630473 177 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC099063.3-201ENST00000642066 185 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 SEC63P2-201ENST00000503863 1939 ntBASIC6.09□□□□□ -1.43
NUP43Q8NFH3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 U3.52-201ENST00000384034 216 ntBASIC6.09□□□□□ -1.43
NUP43Q8NFH3 RNU6-761P-201ENST00000384148 107 ntBASIC6.09□□□□□ -1.43
NUP43Q8NFH3 AL034417.1-201ENST00000399343 800 ntBASIC6.09□□□□□ -1.43
NUP43Q8NFH3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 RN7SKP205-201ENST00000410999 307 ntBASIC6.09□□□□□ -1.43
NUP43Q8NFH3 TPT1P2-201ENST00000413105 503 ntBASIC6.09□□□□□ -1.43
NUP43Q8NFH3 AC019050.1-201ENST00000418508 492 ntBASIC6.09□□□□□ -1.43
NUP43Q8NFH3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 CDC42P6-201ENST00000421246 576 ntBASIC6.09□□□□□ -1.43
NUP43Q8NFH3 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.09□□□□□ -1.43
NUP43Q8NFH3 SPATA20P1-201ENST00000423089 438 ntBASIC6.09□□□□□ -1.43
NUP43Q8NFH3 RPL7P44-201ENST00000424827 742 ntBASIC6.09□□□□□ -1.43
NUP43Q8NFH3 ISCA1P1-201ENST00000426679 387 ntBASIC6.09□□□□□ -1.43
NUP43Q8NFH3 PA2G4P6-201ENST00000438325 1197 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms