Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AC090132.1-201ENST00000524071 1480 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 RNY3P3-201ENST00000363816 102 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 RNU6-316P-201ENST00000391027 107 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 LARP1P1-201ENST00000407692 292 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 CTSLP8-201ENST00000413075 967 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 PPIAP25-201ENST00000420177 540 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 RPS26P40-201ENST00000435209 294 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 HMGB3P12-201ENST00000438745 556 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 MTND4P19-201ENST00000446659 478 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AC073909.1-201ENST00000447112 999 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 MTND1P18-201ENST00000448191 573 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 RPS15AP1-201ENST00000457423 391 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 SNRPD2P1-201ENST00000489253 354 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 RPL17P2-201ENST00000491913 451 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AC023194.1-201ENST00000493084 308 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 GAPDHP61-201ENST00000507324 1005 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AC007424.1-203ENST00000554613 687 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AL121579.2-201ENST00000555466 590 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 DNM1P31-201ENST00000564149 696 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 RN7SL311P-201ENST00000579858 306 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 MIR3689C-201ENST00000581239 72 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AC068790.5-201ENST00000602741 355 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AC013553.2-201ENST00000604244 589 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 CR382285.1-202ENST00000604687 547 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 Z95327.3-201ENST00000610385 572 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AC135507.2-201ENST00000612443 309 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AC084876.1-201ENST00000612793 641 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 AC092821.2-201ENST00000545710 2042 ntBASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
DEPDC4Q8N2C3 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 DDX11L16-201ENST00000507418 1306 ntBASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 AL450124.1-201ENST00000376401 353 ntBASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 RNU6-1227P-201ENST00000383981 107 ntBASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 RPL31P35-201ENST00000431058 377 ntBASIC7.05□□□□□ -1.28
DEPDC4Q8N2C3 RPS3AP54-201ENST00000435535 734 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms