Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC138627.1-204ENST00000641894 765 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 RNU6-167P-201ENST00000384292 106 ntBASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 AC013268.2-201ENST00000420753 337 ntBASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 OR52E7P-201ENST00000452394 933 ntBASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 RPL21P6-201ENST00000479171 504 ntBASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 PPIAP19-201ENST00000486414 492 ntBASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 SNORD95-201ENST00000579879 68 ntBASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 AC097505.1-201ENST00000610199 565 ntBASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 OR8A1-204ENST00000642111 1145 ntBASIC5.4□□□□□ -1.54
CCDC50Q8IVM0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC50Q8IVM0 CR383656.5-201ENST00000547616 1340 ntBASIC5.4□□□□□ -1.55
CCDC50Q8IVM0 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC50Q8IVM0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.4□□□□□ -1.55
CCDC50Q8IVM0 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 UGT2B26P-201ENST00000508672 1613 ntBASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 AL391422.1-201ENST00000402155 436 ntBASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 RN7SKP16-201ENST00000410180 299 ntBASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 RNA5SP178-201ENST00000410380 128 ntBASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 AL390774.1-201ENST00000411924 246 ntBASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 RPL35AP24-201ENST00000413846 330 ntBASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 AL513325.1-201ENST00000417716 1034 ntBASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 AC073587.1-201ENST00000447093 876 ntBASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 BTF3P6-201ENST00000448054 499 ntBASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 AC097173.1-201ENST00000505862 819 ntBASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC50Q8IVM0 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 DDX18P4-201ENST00000511690 1966 ntBASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 RNA5SP242-201ENST00000364171 118 ntBASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 AC013429.2-201ENST00000418798 781 ntBASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 AC009238.2-201ENST00000431026 355 ntBASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 AC090568.1-201ENST00000509499 856 ntBASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 243.3 ms