Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MTND5P3-201ENST00000438536 1800 ntBASIC7.33□□□□□ -1.24
FOXR1Q6PIV2 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.33□□□□□ -1.24
FOXR1Q6PIV2 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
FOXR1Q6PIV2 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
FOXR1Q6PIV2 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
FOXR1Q6PIV2 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.33□□□□□ -1.24
FOXR1Q6PIV2 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.33□□□□□ -1.24
FOXR1Q6PIV2 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
FOXR1Q6PIV2 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 SNORD56.2-201ENST00000363242 71 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 RNU6-501P-201ENST00000364072 100 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 Y_RNA.409-201ENST00000383990 98 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AMD1P2-201ENST00000412936 992 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 USP9YP36-201ENST00000424581 829 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AL009174.1-201ENST00000426577 416 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 MTCO1P3-201ENST00000429327 192 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 CLUHP1-201ENST00000435012 1190 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 GTF2F2P2-201ENST00000445825 721 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 HMGB1P5-202ENST00000451497 985 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 RN7SL456P-201ENST00000469290 295 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AL928654.1-201ENST00000476081 354 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AF305872.1-201ENST00000485217 471 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 EIF4E2P2-201ENST00000492033 736 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 OR5AN2P-201ENST00000534535 896 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 NXPE2P1-201ENST00000543705 726 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AL157687.1-201ENST00000554853 619 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AC006116.6-201ENST00000593258 1103 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AC099676.1-201ENST00000608886 657 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AL592494.3-201ENST00000609485 464 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AP001506.1-201ENST00000615444 211 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AC093909.6-201ENST00000624757 775 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 TTK-211ENST00000627129 240 ntTSL 5 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 RARSP1-201ENST00000542842 1418 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 AC061975.5-201ENST00000584928 1441 ntBASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.32□□□□□ -1.24
FOXR1Q6PIV2 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 MKI67P1-201ENST00000604297 1460 ntBASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 AL359694.2-201ENST00000567753 1615 ntBASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 AC009220.2-201ENST00000489759 1751 ntBASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 AC117529.2-201ENST00000512159 2068 ntBASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 AC023886.2-201ENST00000321285 411 ntBASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 Y_RNA.86-201ENST00000363020 111 ntBASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 RNA5SP27-201ENST00000363839 119 ntBASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 RNA5SP396-201ENST00000364834 120 ntBASIC7.31□□□□□ -1.24
FOXR1Q6PIV2 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms