Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 RN7SKP114-201ENST00000410327 279 ntBASIC4.39□□□□□ -1.71
LRRK2Q5S007 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRRK2Q5S007 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 NOP56P2-201ENST00000447491 769 ntBASIC4.39□□□□□ -1.71
LRRK2Q5S007 AL358232.1-201ENST00000448030 501 ntBASIC4.39□□□□□ -1.71
LRRK2Q5S007 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 AL162739.1-201ENST00000450606 307 ntBASIC4.39□□□□□ -1.71
LRRK2Q5S007 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 RPL7P40-201ENST00000481703 745 ntBASIC4.39□□□□□ -1.71
LRRK2Q5S007 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRRK2Q5S007 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRK2Q5S007 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRK2Q5S007 OR4F13P-202ENST00000560066 2054 ntBASIC4.39□□□□□ -1.71
LRRK2Q5S007 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 NCLP2-201ENST00000416078 1462 ntBASIC4.39□□□□□ -1.71
LRRK2Q5S007 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRRK2Q5S007 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRK2Q5S007 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRRK2Q5S007 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.38□□□□□ -1.71
LRRK2Q5S007 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.38□□□□□ -1.71
LRRK2Q5S007 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.38□□□□□ -1.71
LRRK2Q5S007 AL132765.1-201ENST00000434165 553 ntBASIC4.38□□□□□ -1.71
LRRK2Q5S007 RN7SKP83-201ENST00000516512 178 ntBASIC4.38□□□□□ -1.71
LRRK2Q5S007 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRRK2Q5S007 OR4A6P-201ENST00000534364 970 ntBASIC4.38□□□□□ -1.71
LRRK2Q5S007 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.38□□□□□ -1.71
LRRK2Q5S007 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.38□□□□□ -1.71
LRRK2Q5S007 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.38□□□□□ -1.71
LRRK2Q5S007 AL161756.2-201ENST00000604597 246 ntBASIC4.38□□□□□ -1.71
LRRK2Q5S007 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC4.38□□□□□ -1.71
LRRK2Q5S007 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRRK2Q5S007 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.38□□□□□ -1.71
LRRK2Q5S007 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LRRK2Q5S007 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
LRRK2Q5S007 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRRK2Q5S007 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRRK2Q5S007 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
LRRK2Q5S007 SNORD1C-201ENST00000363315 78 ntBASIC4.38□□□□□ -1.71
LRRK2Q5S007 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LRRK2Q5S007 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LRRK2Q5S007 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
LRRK2Q5S007 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.38□□□□□ -1.71
LRRK2Q5S007 HSFY6P-201ENST00000445573 403 ntBASIC4.38□□□□□ -1.71
LRRK2Q5S007 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.38□□□□□ -1.71
LRRK2Q5S007 RN7SL244P-201ENST00000493405 297 ntBASIC4.38□□□□□ -1.71
LRRK2Q5S007 RPS17P5-201ENST00000498293 408 ntBASIC4.38□□□□□ -1.71
LRRK2Q5S007 OR5M2P-201ENST00000529003 936 ntBASIC4.38□□□□□ -1.71
LRRK2Q5S007 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.38□□□□□ -1.71
LRRK2Q5S007 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRRK2Q5S007 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.38□□□□□ -1.71
LRRK2Q5S007 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.38□□□□□ -1.71
LRRK2Q5S007 H3F3BP2-201ENST00000583907 357 ntBASIC4.38□□□□□ -1.71
LRRK2Q5S007 AC005191.1-201ENST00000603950 358 ntBASIC4.38□□□□□ -1.71
LRRK2Q5S007 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.38□□□□□ -1.71
LRRK2Q5S007 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRRK2Q5S007 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRRK2Q5S007 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRRK2Q5S007 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LRRK2Q5S007 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRRK2Q5S007 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRRK2Q5S007 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRRK2Q5S007 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LRRK2Q5S007 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.37□□□□□ -1.71
LRRK2Q5S007 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.37□□□□□ -1.71
LRRK2Q5S007 AC008481.1-201ENST00000463278 396 ntBASIC4.37□□□□□ -1.71
LRRK2Q5S007 AC011497.2-201ENST00000600255 639 ntBASIC4.37□□□□□ -1.71
LRRK2Q5S007 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LRRK2Q5S007 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.37□□□□□ -1.71
LRRK2Q5S007 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRRK2Q5S007 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LRRK2Q5S007 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRRK2Q5S007 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.37□□□□□ -1.71
LRRK2Q5S007 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.37□□□□□ -1.71
LRRK2Q5S007 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRRK2Q5S007 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.37□□□□□ -1.71
LRRK2Q5S007 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRRK2Q5S007 RAD17P1-201ENST00000418130 2042 ntBASIC4.37□□□□□ -1.71
LRRK2Q5S007 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.37□□□□□ -1.71
LRRK2Q5S007 snoU13.24-201ENST00000458998 104 ntBASIC4.37□□□□□ -1.71
LRRK2Q5S007 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC4.37□□□□□ -1.71
LRRK2Q5S007 AC025884.1-201ENST00000556034 378 ntBASIC4.37□□□□□ -1.71
LRRK2Q5S007 AC112200.1-201ENST00000625015 234 ntBASIC4.37□□□□□ -1.71
LRRK2Q5S007 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
LRRK2Q5S007 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC4.37□□□□□ -1.71
LRRK2Q5S007 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRRK2Q5S007 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRRK2Q5S007 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LRRK2Q5S007 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRRK2Q5S007 AC015799.1-201ENST00000622996 3122 ntBASIC4.37□□□□□ -1.71
LRRK2Q5S007 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LRRK2Q5S007 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.36□□□□□ -1.71
LRRK2Q5S007 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRRK2Q5S007 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms