Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 HMGB3P26-201ENST00000560051 582 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 CU639417.4-201ENST00000623928 207 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 AC073592.6-201ENST00000624271 415 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 BMS1P21-201ENST00000634565 365 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 AC138627.1-204ENST00000641894 765 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 AL672167.1-205ENST00000641112 3080 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 RN7SKP104-201ENST00000362605 328 ntBASIC4.56□□□□□ -1.68
CCDC58Q4VC31 RN7SKP275-201ENST00000364626 301 ntBASIC4.56□□□□□ -1.68
CCDC58Q4VC31 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 GAPDHP15-201ENST00000398586 975 ntBASIC4.56□□□□□ -1.68
CCDC58Q4VC31 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 AL596448.1-201ENST00000415024 392 ntBASIC4.56□□□□□ -1.68
CCDC58Q4VC31 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 RPL7AP61-201ENST00000443410 636 ntBASIC4.56□□□□□ -1.68
CCDC58Q4VC31 AC133473.1-201ENST00000455173 299 ntBASIC4.56□□□□□ -1.68
CCDC58Q4VC31 AC104339.1-201ENST00000465478 348 ntBASIC4.56□□□□□ -1.68
CCDC58Q4VC31 RPL5P30-201ENST00000465511 891 ntBASIC4.56□□□□□ -1.68
CCDC58Q4VC31 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 DEFB109F-201ENST00000491870 277 ntBASIC4.56□□□□□ -1.68
CCDC58Q4VC31 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 NDUFB4P11-201ENST00000560510 395 ntBASIC4.56□□□□□ -1.68
CCDC58Q4VC31 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.56□□□□□ -1.68
CCDC58Q4VC31 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 TAS2R6P-201ENST00000605022 826 ntBASIC4.56□□□□□ -1.68
CCDC58Q4VC31 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 AC074101.1-201ENST00000637861 241 ntBASIC4.56□□□□□ -1.68
CCDC58Q4VC31 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC58Q4VC31 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 AL133388.1-201ENST00000404509 287 ntBASIC4.55□□□□□ -1.68
CCDC58Q4VC31 AL160275.2-201ENST00000412010 394 ntBASIC4.55□□□□□ -1.68
CCDC58Q4VC31 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 AL590609.2-201ENST00000421430 368 ntBASIC4.55□□□□□ -1.68
CCDC58Q4VC31 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 AC104634.1-201ENST00000452720 462 ntBASIC4.55□□□□□ -1.68
CCDC58Q4VC31 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 CYCSP34-201ENST00000458172 304 ntBASIC4.55□□□□□ -1.68
CCDC58Q4VC31 AC091180.1-201ENST00000462104 372 ntBASIC4.55□□□□□ -1.68
CCDC58Q4VC31 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.55□□□□□ -1.68
CCDC58Q4VC31 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 AC027308.1-201ENST00000517993 110 ntBASIC4.55□□□□□ -1.68
CCDC58Q4VC31 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 BLZF2P-201ENST00000553776 1130 ntBASIC4.55□□□□□ -1.68
CCDC58Q4VC31 AC015720.2-201ENST00000567709 334 ntBASIC4.55□□□□□ -1.68
CCDC58Q4VC31 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 RPL26P30-202ENST00000602923 645 ntBASIC4.55□□□□□ -1.68
CCDC58Q4VC31 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 AP005131.7-201ENST00000610087 611 ntBASIC4.55□□□□□ -1.68
CCDC58Q4VC31 AL356752.1-201ENST00000615844 593 ntBASIC4.55□□□□□ -1.68
CCDC58Q4VC31 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 WBP1LP8-201ENST00000617401 327 ntBASIC4.55□□□□□ -1.68
CCDC58Q4VC31 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms