Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
EFNB3Q15768 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.89□□□□□ -1.63
EFNB3Q15768 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
EFNB3Q15768 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EFNB3Q15768 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.89□□□□□ -1.63
EFNB3Q15768 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EFNB3Q15768 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
EFNB3Q15768 RNA5SP131-201ENST00000365452 119 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
EFNB3Q15768 RNU6-1005P-201ENST00000384519 107 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 RNU6-1263P-201ENST00000384601 106 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 GAPDHP42-201ENST00000406848 981 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 OR3A2-201ENST00000408891 1076 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 RN7SKP17-201ENST00000411242 351 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC4.89□□□□□ -1.63
EFNB3Q15768 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.89□□□□□ -1.63
EFNB3Q15768 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.89□□□□□ -1.63
EFNB3Q15768 TNPO1P1-201ENST00000423641 1138 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
EFNB3Q15768 MTATP6P17-201ENST00000431030 672 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
EFNB3Q15768 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.89□□□□□ -1.63
EFNB3Q15768 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.89□□□□□ -1.63
EFNB3Q15768 EEF1B2P6-201ENST00000445713 673 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 RPS23P2-201ENST00000463671 415 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 AC020898.1-201ENST00000474167 787 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 AC093719.1-201ENST00000480427 441 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 EIF1P7-201ENST00000487533 337 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.89□□□□□ -1.63
EFNB3Q15768 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.89□□□□□ -1.63
EFNB3Q15768 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.89□□□□□ -1.63
EFNB3Q15768 AC093815.1-201ENST00000508637 280 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
EFNB3Q15768 TOMM22P4-201ENST00000511318 336 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.89□□□□□ -1.63
EFNB3Q15768 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.89□□□□□ -1.63
EFNB3Q15768 AC026407.1-201ENST00000518369 204 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.89□□□□□ -1.63
EFNB3Q15768 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.89□□□□□ -1.63
EFNB3Q15768 AC034205.1-201ENST00000520621 638 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 AC013701.1-201ENST00000522657 465 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.89□□□□□ -1.63
EFNB3Q15768 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EFNB3Q15768 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.89□□□□□ -1.63
EFNB3Q15768 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
EFNB3Q15768 NPM1P42-201ENST00000560329 862 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.89□□□□□ -1.63
EFNB3Q15768 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.89□□□□□ -1.63
EFNB3Q15768 AC008115.3-201ENST00000614874 549 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 CYCSP41-201ENST00000616920 296 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 AL122125.1-201ENST00000616999 600 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 AC006840.1-201ENST00000623069 542 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.89□□□□□ -1.63
EFNB3Q15768 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.89□□□□□ -1.63
EFNB3Q15768 AC004656.1-201ENST00000568479 4951 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
EFNB3Q15768 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.89□□□□□ -1.63
EFNB3Q15768 CIR1P2-201ENST00000514821 1342 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 KYNUP3-201ENST00000574386 1341 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 YES1P1-201ENST00000418510 1628 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.89□□□□□ -1.63
EFNB3Q15768 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.89□□□□□ -1.63
EFNB3Q15768 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EFNB3Q15768 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
EFNB3Q15768 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.89□□□□□ -1.63
EFNB3Q15768 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
EFNB3Q15768 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
EFNB3Q15768 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.89□□□□□ -1.63
EFNB3Q15768 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.89□□□□□ -1.63
EFNB3Q15768 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.89□□□□□ -1.63
EFNB3Q15768 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
EFNB3Q15768 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
EFNB3Q15768 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EFNB3Q15768 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
EFNB3Q15768 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
EFNB3Q15768 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EFNB3Q15768 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
EFNB3Q15768 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
EFNB3Q15768 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
EFNB3Q15768 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
EFNB3Q15768 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.88□□□□□ -1.63
EFNB3Q15768 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.88□□□□□ -1.63
EFNB3Q15768 RNU1-146P-201ENST00000364015 165 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 RNA5SP132-201ENST00000364725 118 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 RNA5SP30-201ENST00000365552 115 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
EFNB3Q15768 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
EFNB3Q15768 ATP5HP3-201ENST00000396994 486 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 ZNF602P-201ENST00000405929 924 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 RN7SKP229-201ENST00000410465 302 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.88□□□□□ -1.63
EFNB3Q15768 AL590806.1-201ENST00000415818 853 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.88□□□□□ -1.63
EFNB3Q15768 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.88□□□□□ -1.63
EFNB3Q15768 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC4.88□□□□□ -1.63
EFNB3Q15768 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.88□□□□□ -1.63
EFNB3Q15768 AL035458.1-201ENST00000433096 585 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 GAPDHP48-201ENST00000436626 961 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 MED6P1-201ENST00000439659 713 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms