Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LMO4P61968 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.39□□□□□ -1.71
LMO4P61968 ATP5G1P3-201ENST00000463301 410 ntBASIC4.39□□□□□ -1.71
LMO4P61968 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LMO4P61968 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.39□□□□□ -1.71
LMO4P61968 GTF2F2P1-201ENST00000511083 675 ntBASIC4.39□□□□□ -1.71
LMO4P61968 AC013701.1-201ENST00000522657 465 ntBASIC4.39□□□□□ -1.71
LMO4P61968 AP000676.2-201ENST00000529711 301 ntBASIC4.39□□□□□ -1.71
LMO4P61968 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.39□□□□□ -1.71
LMO4P61968 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
LMO4P61968 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.39□□□□□ -1.71
LMO4P61968 AL121594.4-201ENST00000556211 1196 ntBASIC4.39□□□□□ -1.71
LMO4P61968 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.39□□□□□ -1.71
LMO4P61968 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
LMO4P61968 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.39□□□□□ -1.71
LMO4P61968 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.39□□□□□ -1.71
LMO4P61968 AC097504.2-201ENST00000608088 454 ntBASIC4.39□□□□□ -1.71
LMO4P61968 AL139124.1-201ENST00000609123 421 ntBASIC4.39□□□□□ -1.71
LMO4P61968 AC097478.2-201ENST00000610572 514 ntBASIC4.39□□□□□ -1.71
LMO4P61968 AC004777.1-201ENST00000624317 287 ntBASIC4.39□□□□□ -1.71
LMO4P61968 AP003400.3-201ENST00000624904 346 ntBASIC4.39□□□□□ -1.71
LMO4P61968 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LMO4P61968 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LMO4P61968 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LMO4P61968 CASC19-281ENST00000642118 1554 ntBASIC4.39□□□□□ -1.71
LMO4P61968 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.39□□□□□ -1.71
LMO4P61968 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LMO4P61968 AC092747.4-201ENST00000620519 1861 ntBASIC4.39□□□□□ -1.71
LMO4P61968 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LMO4P61968 AC087565.3-202ENST00000642085 1603 ntBASIC4.39□□□□□ -1.71
LMO4P61968 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LMO4P61968 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.38□□□□□ -1.71
LMO4P61968 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.38□□□□□ -1.71
LMO4P61968 AC232271.1-201ENST00000602455 2715 ntBASIC4.38□□□□□ -1.71
LMO4P61968 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.38□□□□□ -1.71
LMO4P61968 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMO4P61968 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LMO4P61968 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC4.38□□□□□ -1.71
LMO4P61968 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.38□□□□□ -1.71
LMO4P61968 AC023421.1-201ENST00000590535 1785 ntBASIC4.38□□□□□ -1.71
LMO4P61968 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LMO4P61968 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.38□□□□□ -1.71
LMO4P61968 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.38□□□□□ -1.71
LMO4P61968 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMO4P61968 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMO4P61968 AC092681.1-201ENST00000297369 291 ntBASIC4.38□□□□□ -1.71
LMO4P61968 U3.3-201ENST00000362986 216 ntBASIC4.38□□□□□ -1.71
LMO4P61968 RNU4-4P-201ENST00000364588 130 ntBASIC4.38□□□□□ -1.71
LMO4P61968 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.38□□□□□ -1.71
LMO4P61968 MIR600-201ENST00000385007 98 ntBASIC4.38□□□□□ -1.71
LMO4P61968 RNU2-22P-201ENST00000411266 212 ntBASIC4.38□□□□□ -1.71
LMO4P61968 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.38□□□□□ -1.71
LMO4P61968 RBMY2KP-201ENST00000418221 992 ntBASIC4.38□□□□□ -1.71
LMO4P61968 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.38□□□□□ -1.71
LMO4P61968 AC007064.3-201ENST00000422608 359 ntBASIC4.38□□□□□ -1.71
LMO4P61968 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LMO4P61968 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.38□□□□□ -1.71
LMO4P61968 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.38□□□□□ -1.71
LMO4P61968 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.38□□□□□ -1.71
LMO4P61968 AL691517.1-201ENST00000440833 1235 ntBASIC4.38□□□□□ -1.71
LMO4P61968 AC092647.3-201ENST00000443044 633 ntBASIC4.38□□□□□ -1.71
LMO4P61968 AC092647.2-201ENST00000452998 253 ntBASIC4.38□□□□□ -1.71
LMO4P61968 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.38□□□□□ -1.71
LMO4P61968 AC079168.1-201ENST00000458741 345 ntBASIC4.38□□□□□ -1.71
LMO4P61968 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.38□□□□□ -1.71
LMO4P61968 UBE2V1P12-201ENST00000503954 474 ntBASIC4.38□□□□□ -1.71
LMO4P61968 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.38□□□□□ -1.71
LMO4P61968 AC110775.1-201ENST00000513721 462 ntBASIC4.38□□□□□ -1.71
LMO4P61968 EIF3KP3-201ENST00000514461 639 ntBASIC4.38□□□□□ -1.71
LMO4P61968 OR4A17P-201ENST00000526032 904 ntBASIC4.38□□□□□ -1.71
LMO4P61968 OR5D15P-201ENST00000531671 942 ntBASIC4.38□□□□□ -1.71
LMO4P61968 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.38□□□□□ -1.71
LMO4P61968 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMO4P61968 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.38□□□□□ -1.71
LMO4P61968 AC092490.3-201ENST00000545370 572 ntBASIC4.38□□□□□ -1.71
LMO4P61968 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.38□□□□□ -1.71
LMO4P61968 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.38□□□□□ -1.71
LMO4P61968 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMO4P61968 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.38□□□□□ -1.71
LMO4P61968 OR1F2P-201ENST00000570470 933 ntBASIC4.38□□□□□ -1.71
LMO4P61968 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.38□□□□□ -1.71
LMO4P61968 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.38□□□□□ -1.71
LMO4P61968 AC009027.1-201ENST00000604510 479 ntBASIC4.38□□□□□ -1.71
LMO4P61968 AC009597.2-201ENST00000604659 592 ntBASIC4.38□□□□□ -1.71
LMO4P61968 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.38□□□□□ -1.71
LMO4P61968 AC244107.2-201ENST00000611773 76 ntBASIC4.38□□□□□ -1.71
LMO4P61968 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.38□□□□□ -1.71
LMO4P61968 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.38□□□□□ -1.71
LMO4P61968 AC097372.4-201ENST00000625025 466 ntBASIC4.38□□□□□ -1.71
LMO4P61968 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LMO4P61968 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
LMO4P61968 AL360270.2-201ENST00000562952 5985 ntBASIC4.38□□□□□ -1.71
LMO4P61968 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC4.38□□□□□ -1.71
LMO4P61968 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LMO4P61968 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMO4P61968 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LMO4P61968 SAMM50P1-201ENST00000455403 1399 ntBASIC4.38□□□□□ -1.71
LMO4P61968 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LMO4P61968 CCAT2-201ENST00000630920 1752 ntBASIC4.37□□□□□ -1.71
LMO4P61968 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms