Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 MTCO1P51-201ENST00000427672 1060 ntBASIC4.28□□□□□ -1.72
SPCS3P61009 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.28□□□□□ -1.72
SPCS3P61009 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.28□□□□□ -1.72
SPCS3P61009 RN7SL814P-201ENST00000487715 300 ntBASIC4.28□□□□□ -1.72
SPCS3P61009 AGGF1P3-201ENST00000493675 1213 ntBASIC4.28□□□□□ -1.72
SPCS3P61009 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.28□□□□□ -1.72
SPCS3P61009 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.28□□□□□ -1.72
SPCS3P61009 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SPCS3P61009 AC068305.2-201ENST00000550567 1205 ntBASIC4.28□□□□□ -1.72
SPCS3P61009 AC068446.3-201ENST00000555285 382 ntBASIC4.28□□□□□ -1.72
SPCS3P61009 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SPCS3P61009 ARGFXP2-201ENST00000579304 949 ntBASIC4.28□□□□□ -1.72
SPCS3P61009 AC009597.2-201ENST00000604659 592 ntBASIC4.28□□□□□ -1.72
SPCS3P61009 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.28□□□□□ -1.72
SPCS3P61009 AL591926.1-201ENST00000620542 217 ntBASIC4.28□□□□□ -1.72
SPCS3P61009 AL683826.1-201ENST00000624104 627 ntBASIC4.28□□□□□ -1.72
SPCS3P61009 AP000648.2-201ENST00000624182 404 ntBASIC4.28□□□□□ -1.72
SPCS3P61009 MIR6715B-201ENST00000637172 77 ntBASIC4.28□□□□□ -1.72
SPCS3P61009 AC138627.1-204ENST00000641894 765 ntBASIC4.28□□□□□ -1.72
SPCS3P61009 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.28□□□□□ -1.72
SPCS3P61009 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SPCS3P61009 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SPCS3P61009 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SPCS3P61009 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SPCS3P61009 YES1P1-201ENST00000418510 1628 ntBASIC4.28□□□□□ -1.72
SPCS3P61009 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.27□□□□□ -1.73
SPCS3P61009 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SPCS3P61009 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SPCS3P61009 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.27□□□□□ -1.73
SPCS3P61009 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SPCS3P61009 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
SPCS3P61009 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.27□□□□□ -1.73
SPCS3P61009 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
SPCS3P61009 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SPCS3P61009 IL6STP1-201ENST00000346911 1020 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.27□□□□□ -1.73
SPCS3P61009 RNU1-65P-201ENST00000363919 148 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SPCS3P61009 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SPCS3P61009 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SPCS3P61009 HSPA8P15-201ENST00000401676 786 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 AL603766.1-201ENST00000407763 664 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.27□□□□□ -1.73
SPCS3P61009 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.27□□□□□ -1.73
SPCS3P61009 AC104333.2-201ENST00000422630 192 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.27□□□□□ -1.73
SPCS3P61009 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.27□□□□□ -1.73
SPCS3P61009 BX842559.2-201ENST00000451418 605 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 AC073476.1-201ENST00000452854 407 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.27□□□□□ -1.73
SPCS3P61009 CTSLP6-201ENST00000458273 1002 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.27□□□□□ -1.73
SPCS3P61009 AC093270.2-201ENST00000486157 792 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 OR2A3P-201ENST00000493774 953 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 HMGB3P16-201ENST00000508037 287 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.27□□□□□ -1.73
SPCS3P61009 snoU109.6-201ENST00000516831 118 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 RN7SKP99-201ENST00000517028 307 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 SNORA43.3-201ENST00000517240 103 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.27□□□□□ -1.73
SPCS3P61009 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.27□□□□□ -1.73
SPCS3P61009 NRBF2P4-201ENST00000520874 850 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SPCS3P61009 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.27□□□□□ -1.73
SPCS3P61009 AC079600.1-201ENST00000550326 297 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.27□□□□□ -1.73
SPCS3P61009 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.27□□□□□ -1.73
SPCS3P61009 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.27□□□□□ -1.73
SPCS3P61009 AC073592.6-201ENST00000624271 415 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.27□□□□□ -1.73
SPCS3P61009 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.27□□□□□ -1.73
SPCS3P61009 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.27□□□□□ -1.73
SPCS3P61009 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SPCS3P61009 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SPCS3P61009 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.27□□□□□ -1.73
SPCS3P61009 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SPCS3P61009 AC106872.5-201ENST00000508856 1416 ntBASIC4.27□□□□□ -1.73
SPCS3P61009 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SPCS3P61009 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SPCS3P61009 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
SPCS3P61009 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.27□□□□□ -1.73
SPCS3P61009 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SPCS3P61009 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SPCS3P61009 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.26□□□□□ -1.73
SPCS3P61009 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SPCS3P61009 OR11H5P-202ENST00000641612 1325 ntBASIC4.26□□□□□ -1.73
SPCS3P61009 AC068254.2-201ENST00000623938 3577 ntBASIC4.26□□□□□ -1.73
SPCS3P61009 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SPCS3P61009 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.26□□□□□ -1.73
SPCS3P61009 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SPCS3P61009 MIR589-201ENST00000385238 99 ntBASIC4.26□□□□□ -1.73
SPCS3P61009 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SPCS3P61009 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.26□□□□□ -1.73
SPCS3P61009 AL161722.2-201ENST00000434731 981 ntBASIC4.26□□□□□ -1.73
SPCS3P61009 GSTM5P1-201ENST00000434751 660 ntBASIC4.26□□□□□ -1.73
SPCS3P61009 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.26□□□□□ -1.73
SPCS3P61009 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.26□□□□□ -1.73
SPCS3P61009 GAPDHP25-201ENST00000447061 1001 ntBASIC4.26□□□□□ -1.73
SPCS3P61009 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms