Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RNA5SP319-201ENST00000362768 119 ntBASIC4.37□□□□□ -1.71
CLDN12P56749 U3.3-201ENST00000362986 216 ntBASIC4.37□□□□□ -1.71
CLDN12P56749 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDN12P56749 RNA5SP122-201ENST00000384457 108 ntBASIC4.37□□□□□ -1.71
CLDN12P56749 SNORA81-201ENST00000408493 178 ntBASIC4.37□□□□□ -1.71
CLDN12P56749 BMS1P17-202ENST00000416720 316 ntBASIC4.37□□□□□ -1.71
CLDN12P56749 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDN12P56749 AC115283.1-201ENST00000427353 400 ntBASIC4.37□□□□□ -1.71
CLDN12P56749 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDN12P56749 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN12P56749 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDN12P56749 AL691482.1-201ENST00000453255 87 ntBASIC4.37□□□□□ -1.71
CLDN12P56749 AC112206.1-201ENST00000468416 477 ntBASIC4.37□□□□□ -1.71
CLDN12P56749 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDN12P56749 RPL9P15-201ENST00000491096 532 ntBASIC4.37□□□□□ -1.71
CLDN12P56749 AC092349.1-201ENST00000504903 310 ntBASIC4.37□□□□□ -1.71
CLDN12P56749 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.37□□□□□ -1.71
CLDN12P56749 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN12P56749 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDN12P56749 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDN12P56749 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
CLDN12P56749 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN12P56749 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLDN12P56749 AC116553.2-201ENST00000564203 463 ntBASIC4.37□□□□□ -1.71
CLDN12P56749 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDN12P56749 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN12P56749 AP005432.2-201ENST00000608162 586 ntBASIC4.37□□□□□ -1.71
CLDN12P56749 AL159169.2-201ENST00000610061 1269 ntBASIC4.37□□□□□ -1.71
CLDN12P56749 AP005131.7-201ENST00000610087 611 ntBASIC4.37□□□□□ -1.71
CLDN12P56749 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.37□□□□□ -1.71
CLDN12P56749 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.37□□□□□ -1.71
CLDN12P56749 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN12P56749 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN12P56749 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN12P56749 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDN12P56749 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLDN12P56749 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDN12P56749 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN12P56749 MAPK10-349ENST00000641767 3661 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN12P56749 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN12P56749 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN12P56749 AC107027.3-201ENST00000565095 3473 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN12P56749 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
CLDN12P56749 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN12P56749 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CLDN12P56749 RNU1-149P-201ENST00000390870 161 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 EEF1B2P8-201ENST00000414101 671 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.36□□□□□ -1.71
CLDN12P56749 TMBIM7P-201ENST00000418074 855 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 QRSL1P2-201ENST00000418582 964 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 EIF4A1P1-201ENST00000420241 934 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 EI24P4-201ENST00000423683 1078 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN12P56749 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN12P56749 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN12P56749 AC002504.1-201ENST00000438281 691 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 AC073052.1-201ENST00000440417 714 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 HSPE1P22-201ENST00000456856 327 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 AC022795.1-201ENST00000473808 480 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN12P56749 AL117692.1-201ENST00000494283 713 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 RPEP1-201ENST00000504507 658 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN12P56749 RN7SKP46-201ENST00000515942 234 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 RNA5SP464-201ENST00000516251 108 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 RNU6-941P-201ENST00000516346 108 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.36□□□□□ -1.71
CLDN12P56749 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN12P56749 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN12P56749 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN12P56749 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.36□□□□□ -1.71
CLDN12P56749 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN12P56749 AC124856.1-201ENST00000600819 896 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 AL138895.2-201ENST00000603019 178 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN12P56749 AC048341.3-201ENST00000619323 491 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN12P56749 CYP4F35P-202ENST00000636121 390 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CLDN12P56749 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN12P56749 AC000123.3-201ENST00000624029 4975 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.36□□□□□ -1.71
CLDN12P56749 NEAT1-202ENST00000501122 22743 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 HSPA8P18-201ENST00000439846 1928 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CLDN12P56749 AC120338.1-201ENST00000625074 1541 ntBASIC4.36□□□□□ -1.71
CLDN12P56749 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CLDN12P56749 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN12P56749 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.35□□□□□ -1.71
CLDN12P56749 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.35□□□□□ -1.71
CLDN12P56749 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN12P56749 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.35□□□□□ -1.71
CLDN12P56749 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN12P56749 RNU1-77P-201ENST00000390868 162 ntBASIC4.35□□□□□ -1.71
CLDN12P56749 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CLDN12P56749 OR7E156P-201ENST00000400303 464 ntBASIC4.35□□□□□ -1.71
CLDN12P56749 SEPT7P8-201ENST00000413308 775 ntBASIC4.35□□□□□ -1.71
CLDN12P56749 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms