Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HTTP42858 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC5.25□□□□□ -1.57
HTTP42858 SNORA62.3-201ENST00000365110 153 ntBASIC5.25□□□□□ -1.57
HTTP42858 RNA5SP372-201ENST00000390836 115 ntBASIC5.25□□□□□ -1.57
HTTP42858 AL583835.1-201ENST00000399570 407 ntBASIC5.25□□□□□ -1.57
HTTP42858 AC011933.1-201ENST00000413334 321 ntBASIC5.25□□□□□ -1.57
HTTP42858 RPL21P89-201ENST00000444021 467 ntBASIC5.25□□□□□ -1.57
HTTP42858 AC116533.1-201ENST00000459748 321 ntBASIC5.25□□□□□ -1.57
HTTP42858 RNU1-6P-201ENST00000516290 144 ntBASIC5.25□□□□□ -1.57
HTTP42858 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HTTP42858 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HTTP42858 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.25□□□□□ -1.57
HTTP42858 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.25□□□□□ -1.57
HTTP42858 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.25□□□□□ -1.57
HTTP42858 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.25□□□□□ -1.57
HTTP42858 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.25□□□□□ -1.57
HTTP42858 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HTTP42858 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HTTP42858 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HTTP42858 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HTTP42858 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HTTP42858 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HTTP42858 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HTTP42858 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC5.25□□□□□ -1.57
HTTP42858 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.25□□□□□ -1.57
HTTP42858 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC5.25□□□□□ -1.57
HTTP42858 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
HTTP42858 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.25□□□□□ -1.57
HTTP42858 AC018644.1-201ENST00000429934 551 ntBASIC5.25□□□□□ -1.57
HTTP42858 RPL37P1-201ENST00000432310 284 ntBASIC5.25□□□□□ -1.57
HTTP42858 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.25□□□□□ -1.57
HTTP42858 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.25□□□□□ -1.57
HTTP42858 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.25□□□□□ -1.57
HTTP42858 RN7SL652P-201ENST00000577769 300 ntBASIC5.25□□□□□ -1.57
HTTP42858 MIR6867-201ENST00000610636 67 ntBASIC5.25□□□□□ -1.57
HTTP42858 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HTTP42858 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HTTP42858 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HTTP42858 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HTTP42858 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HTTP42858 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.24□□□□□ -1.57
HTTP42858 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HTTP42858 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HTTP42858 AC009951.1-201ENST00000623674 2614 ntBASIC5.24□□□□□ -1.57
HTTP42858 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HTTP42858 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HTTP42858 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC5.24□□□□□ -1.57
HTTP42858 MIR554-201ENST00000384874 96 ntBASIC5.24□□□□□ -1.57
HTTP42858 TMSB10P2-201ENST00000416049 131 ntBASIC5.24□□□□□ -1.57
HTTP42858 AC046176.1-201ENST00000435260 1170 ntBASIC5.24□□□□□ -1.57
HTTP42858 AL133547.1-201ENST00000448546 220 ntBASIC5.24□□□□□ -1.57
HTTP42858 AC053481.1-201ENST00000467217 306 ntBASIC5.24□□□□□ -1.57
HTTP42858 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.24□□□□□ -1.57
HTTP42858 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.24□□□□□ -1.57
HTTP42858 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.24□□□□□ -1.57
HTTP42858 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.24□□□□□ -1.57
HTTP42858 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HTTP42858 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HTTP42858 GNG5P2-201ENST00000372054 207 ntBASIC5.24□□□□□ -1.57
HTTP42858 RN7SKP267-201ENST00000410381 285 ntBASIC5.24□□□□□ -1.57
HTTP42858 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.24□□□□□ -1.57
HTTP42858 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.24□□□□□ -1.57
HTTP42858 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.24□□□□□ -1.57
HTTP42858 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.24□□□□□ -1.57
HTTP42858 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.24□□□□□ -1.57
HTTP42858 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.24□□□□□ -1.57
HTTP42858 AC006116.5-201ENST00000591936 559 ntBASIC5.24□□□□□ -1.57
HTTP42858 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.24□□□□□ -1.57
HTTP42858 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HTTP42858 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HTTP42858 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HTTP42858 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.24□□□□□ -1.57
HTTP42858 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HTTP42858 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HTTP42858 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HTTP42858 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HTTP42858 RNU1-132P-201ENST00000364300 164 ntBASIC5.23□□□□□ -1.57
HTTP42858 AC069157.1-201ENST00000421749 137 ntBASIC5.23□□□□□ -1.57
HTTP42858 AC011998.1-201ENST00000433403 117 ntBASIC5.23□□□□□ -1.57
HTTP42858 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.23□□□□□ -1.57
HTTP42858 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.23□□□□□ -1.57
HTTP42858 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.23□□□□□ -1.57
HTTP42858 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.23□□□□□ -1.57
HTTP42858 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.23□□□□□ -1.57
HTTP42858 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HTTP42858 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC5.23□□□□□ -1.57
HTTP42858 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.23□□□□□ -1.57
HTTP42858 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC5.23□□□□□ -1.57
HTTP42858 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HTTP42858 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.23□□□□□ -1.57
HTTP42858 AC010478.1-201ENST00000601500 6762 ntBASIC5.23□□□□□ -1.57
HTTP42858 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HTTP42858 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HTTP42858 AL158163.1-201ENST00000603915 1649 ntBASIC5.23□□□□□ -1.57
HTTP42858 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HTTP42858 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.23□□□□□ -1.57
HTTP42858 DHFRP3-201ENST00000455595 559 ntBASIC5.23□□□□□ -1.57
HTTP42858 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.23□□□□□ -1.57
HTTP42858 AC027807.1-201ENST00000559921 996 ntBASIC5.23□□□□□ -1.57
HTTP42858 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms