Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HNF4AP41235 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.3□□□□□ -1.56
HNF4AP41235 AC068714.1-201ENST00000559623 800 ntBASIC5.3□□□□□ -1.56
HNF4AP41235 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.3□□□□□ -1.56
HNF4AP41235 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.3□□□□□ -1.56
HNF4AP41235 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HNF4AP41235 FO393422.1-201ENST00000603908 708 ntBASIC5.3□□□□□ -1.56
HNF4AP41235 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.3□□□□□ -1.56
HNF4AP41235 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HNF4AP41235 AC073869.8-201ENST00000641806 335 ntBASIC5.3□□□□□ -1.56
HNF4AP41235 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HNF4AP41235 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HNF4AP41235 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HNF4AP41235 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
HNF4AP41235 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.3□□□□□ -1.56
HNF4AP41235 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HNF4AP41235 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HNF4AP41235 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HNF4AP41235 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HNF4AP41235 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HNF4AP41235 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.29□□□□□ -1.56
HNF4AP41235 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.29□□□□□ -1.56
HNF4AP41235 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
HNF4AP41235 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HNF4AP41235 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HNF4AP41235 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.29□□□□□ -1.56
HNF4AP41235 RN7SKP224-201ENST00000364140 325 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 RNU4-2-201ENST00000365668 141 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 MIR421-201ENST00000365696 85 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HNF4AP41235 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HNF4AP41235 SNORA17A-201ENST00000391185 133 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 PPIAP9-201ENST00000403866 498 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 GPS2P1-201ENST00000411761 986 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.29□□□□□ -1.56
HNF4AP41235 SDHDP6-201ENST00000414693 480 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 RPL6P29-201ENST00000414863 865 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 AL596448.1-201ENST00000415024 392 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 AC017019.1-201ENST00000426129 261 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 RPS26P47-201ENST00000427219 348 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 AC012497.1-201ENST00000429392 575 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 MTCO3P21-201ENST00000430791 643 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 RPL12P17-201ENST00000432393 498 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.29□□□□□ -1.56
HNF4AP41235 AP000281.1-201ENST00000444036 316 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.29□□□□□ -1.56
HNF4AP41235 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.29□□□□□ -1.56
HNF4AP41235 CBX1P2-201ENST00000453841 458 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.29□□□□□ -1.56
HNF4AP41235 METTL15P1-201ENST00000481421 1045 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 RPL7P51-201ENST00000490532 749 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.29□□□□□ -1.56
HNF4AP41235 HMGB1P47-201ENST00000511281 589 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 AC016550.3-201ENST00000515706 767 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.29□□□□□ -1.56
HNF4AP41235 IGLVIV-64-201ENST00000518581 301 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.29□□□□□ -1.56
HNF4AP41235 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.29□□□□□ -1.56
HNF4AP41235 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.29□□□□□ -1.56
HNF4AP41235 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.29□□□□□ -1.56
HNF4AP41235 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.29□□□□□ -1.56
HNF4AP41235 AC022404.1-201ENST00000555320 273 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 SNORD95-201ENST00000579879 68 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HNF4AP41235 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.29□□□□□ -1.56
HNF4AP41235 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.29□□□□□ -1.56
HNF4AP41235 AC012616.1-201ENST00000600294 197 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 AC123786.2-201ENST00000603459 275 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 FAM72A-208ENST00000607379 1139 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.29□□□□□ -1.56
HNF4AP41235 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.29□□□□□ -1.56
HNF4AP41235 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.29□□□□□ -1.56
HNF4AP41235 SNORA17.5-201ENST00000630429 132 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.29□□□□□ -1.56
HNF4AP41235 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HNF4AP41235 AC100757.1-201ENST00000616872 1835 ntBASIC5.29□□□□□ -1.56
HNF4AP41235 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
HNF4AP41235 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.29□□□□□ -1.56
HNF4AP41235 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
HNF4AP41235 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.29□□□□□ -1.56
HNF4AP41235 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HNF4AP41235 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HNF4AP41235 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HNF4AP41235 AC007382.1-201ENST00000624376 2618 ntBASIC5.28□□□□□ -1.56
HNF4AP41235 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HNF4AP41235 AC112198.2-201ENST00000426589 6996 ntBASIC5.28□□□□□ -1.56
HNF4AP41235 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
HNF4AP41235 AC092376.2-201ENST00000622621 4116 ntBASIC5.28□□□□□ -1.56
HNF4AP41235 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HNF4AP41235 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HNF4AP41235 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HNF4AP41235 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.28□□□□□ -1.56
HNF4AP41235 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HNF4AP41235 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HNF4AP41235 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HNF4AP41235 RNU4-44P-201ENST00000363050 141 ntBASIC5.28□□□□□ -1.56
HNF4AP41235 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HNF4AP41235 BMS1P3-201ENST00000372011 932 ntBASIC5.28□□□□□ -1.56
HNF4AP41235 RNU6-532P-201ENST00000384318 107 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms