Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX3P41225 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX3P41225 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
SOX3P41225 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SOX3P41225 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
SOX3P41225 AC011493.1-201ENST00000596753 1632 ntBASIC4.94□□□□□ -1.62
SOX3P41225 AC087565.3-202ENST00000642085 1603 ntBASIC4.94□□□□□ -1.62
SOX3P41225 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SOX3P41225 MTND4P21-201ENST00000453886 1357 ntBASIC4.94□□□□□ -1.62
SOX3P41225 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SOX3P41225 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX3P41225 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX3P41225 OR1L6-202ENST00000373684 1044 ntBASIC4.94□□□□□ -1.62
SOX3P41225 RNU6-152P-201ENST00000384037 107 ntBASIC4.94□□□□□ -1.62
SOX3P41225 DBIP1-201ENST00000401435 260 ntBASIC4.94□□□□□ -1.62
SOX3P41225 HSPA8P15-201ENST00000401676 786 ntBASIC4.94□□□□□ -1.62
SOX3P41225 OR1F12-201ENST00000402365 945 ntBASIC4.94□□□□□ -1.62
SOX3P41225 AC211486.3-201ENST00000412694 621 ntBASIC4.94□□□□□ -1.62
SOX3P41225 RPL12P9-201ENST00000412942 488 ntBASIC4.94□□□□□ -1.62
SOX3P41225 BMS1P13-201ENST00000417301 885 ntBASIC4.94□□□□□ -1.62
SOX3P41225 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX3P41225 AL139148.1-201ENST00000427122 680 ntBASIC4.94□□□□□ -1.62
SOX3P41225 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SOX3P41225 RPL19P16-201ENST00000433839 588 ntBASIC4.94□□□□□ -1.62
SOX3P41225 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX3P41225 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX3P41225 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.94□□□□□ -1.62
SOX3P41225 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX3P41225 AC079841.1-201ENST00000481228 950 ntBASIC4.94□□□□□ -1.62
SOX3P41225 RWDD4P1-201ENST00000488019 565 ntBASIC4.94□□□□□ -1.62
SOX3P41225 AC072052.1-201ENST00000496556 306 ntBASIC4.94□□□□□ -1.62
SOX3P41225 RPS26P24-201ENST00000497656 331 ntBASIC4.94□□□□□ -1.62
SOX3P41225 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.94□□□□□ -1.62
SOX3P41225 AC006499.3-201ENST00000506077 748 ntBASIC4.94□□□□□ -1.62
SOX3P41225 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.94□□□□□ -1.62
SOX3P41225 AC016559.2-201ENST00000510759 359 ntBASIC4.94□□□□□ -1.62
SOX3P41225 HMGN1P9-201ENST00000515212 298 ntBASIC4.94□□□□□ -1.62
SOX3P41225 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.94□□□□□ -1.62
SOX3P41225 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SOX3P41225 OR11H3P-201ENST00000554547 982 ntBASIC4.94□□□□□ -1.62
SOX3P41225 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX3P41225 AC016180.1-201ENST00000567945 403 ntBASIC4.94□□□□□ -1.62
SOX3P41225 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX3P41225 RN7SL356P-201ENST00000582228 248 ntBASIC4.94□□□□□ -1.62
SOX3P41225 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SOX3P41225 AC069307.1-201ENST00000602820 447 ntBASIC4.94□□□□□ -1.62
SOX3P41225 AC084036.1-201ENST00000609190 508 ntBASIC4.94□□□□□ -1.62
SOX3P41225 AC126915.2-201ENST00000610957 190 ntBASIC4.94□□□□□ -1.62
SOX3P41225 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.94□□□□□ -1.62
SOX3P41225 AL162233.1-201ENST00000620014 944 ntBASIC4.94□□□□□ -1.62
SOX3P41225 AC135068.5-201ENST00000624197 983 ntBASIC4.94□□□□□ -1.62
SOX3P41225 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX3P41225 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX3P41225 OR55B1P-203ENST00000641518 2602 ntBASIC4.94□□□□□ -1.62
SOX3P41225 HSPA8P14-201ENST00000552265 1805 ntBASIC4.94□□□□□ -1.62
SOX3P41225 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
SOX3P41225 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SOX3P41225 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
SOX3P41225 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX3P41225 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.94□□□□□ -1.62
SOX3P41225 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SOX3P41225 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SOX3P41225 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX3P41225 AC093909.5-201ENST00000621839 1799 ntBASIC4.93□□□□□ -1.62
SOX3P41225 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX3P41225 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
SOX3P41225 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
SOX3P41225 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX3P41225 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX3P41225 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SOX3P41225 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX3P41225 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.93□□□□□ -1.62
SOX3P41225 TRIM51GP-201ENST00000534741 1350 ntBASIC4.93□□□□□ -1.62
SOX3P41225 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
SOX3P41225 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SOX3P41225 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SOX3P41225 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.93□□□□□ -1.62
SOX3P41225 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX3P41225 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SOX3P41225 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX3P41225 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SOX3P41225 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SOX3P41225 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX3P41225 MIR105-1-201ENST00000385222 81 ntBASIC4.93□□□□□ -1.62
SOX3P41225 RPL21P67-201ENST00000402896 478 ntBASIC4.93□□□□□ -1.62
SOX3P41225 RAB9AP4-201ENST00000415230 609 ntBASIC4.93□□□□□ -1.62
SOX3P41225 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.93□□□□□ -1.62
SOX3P41225 ARAFP1-201ENST00000422172 605 ntBASIC4.93□□□□□ -1.62
SOX3P41225 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.93□□□□□ -1.62
SOX3P41225 AC017019.1-201ENST00000426129 261 ntBASIC4.93□□□□□ -1.62
SOX3P41225 HSPD1P12-201ENST00000429127 1069 ntBASIC4.93□□□□□ -1.62
SOX3P41225 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.93□□□□□ -1.62
SOX3P41225 MRPS33P4-201ENST00000434892 317 ntBASIC4.93□□□□□ -1.62
SOX3P41225 RPS15AP29-201ENST00000445539 400 ntBASIC4.93□□□□□ -1.62
SOX3P41225 AL035090.1-201ENST00000454835 332 ntBASIC4.93□□□□□ -1.62
SOX3P41225 AC021660.1-201ENST00000465006 554 ntBASIC4.93□□□□□ -1.62
SOX3P41225 RN7SL222P-201ENST00000476452 299 ntBASIC4.93□□□□□ -1.62
SOX3P41225 AC015864.1-201ENST00000496512 544 ntBASIC4.93□□□□□ -1.62
SOX3P41225 AC008953.1-201ENST00000497334 318 ntBASIC4.93□□□□□ -1.62
SOX3P41225 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms