Protein–RNA interactions for Protein: P35247

SFTPD, Pulmonary surfactant-associated protein D, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPDP35247 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SFTPDP35247 RNU6-599P-201ENST00000459383 107 ntBASIC4.84□□□□□ -1.63
SFTPDP35247 RNU6-1193P-201ENST00000459461 107 ntBASIC4.84□□□□□ -1.63
SFTPDP35247 AL049829.1-201ENST00000465411 156 ntBASIC4.84□□□□□ -1.63
SFTPDP35247 RPL7P39-201ENST00000481157 744 ntBASIC4.84□□□□□ -1.63
SFTPDP35247 AC015864.1-201ENST00000496512 544 ntBASIC4.84□□□□□ -1.63
SFTPDP35247 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.84□□□□□ -1.63
SFTPDP35247 AC021146.7-201ENST00000509604 775 ntBASIC4.84□□□□□ -1.63
SFTPDP35247 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.84□□□□□ -1.63
SFTPDP35247 HMGB1P46-201ENST00000520062 610 ntBASIC4.84□□□□□ -1.63
SFTPDP35247 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.84□□□□□ -1.63
SFTPDP35247 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.84□□□□□ -1.63
SFTPDP35247 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
SFTPDP35247 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.84□□□□□ -1.63
SFTPDP35247 RN7SL356P-201ENST00000582228 248 ntBASIC4.84□□□□□ -1.63
SFTPDP35247 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.84□□□□□ -1.63
SFTPDP35247 AC009237.13-201ENST00000603193 276 ntBASIC4.84□□□□□ -1.63
SFTPDP35247 AC108738.1-201ENST00000603703 237 ntBASIC4.84□□□□□ -1.63
SFTPDP35247 AC242628.1-201ENST00000606810 391 ntBASIC4.84□□□□□ -1.63
SFTPDP35247 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SFTPDP35247 AC109583.2-201ENST00000617367 129 ntBASIC4.84□□□□□ -1.63
SFTPDP35247 MIR6826-201ENST00000617808 98 ntBASIC4.84□□□□□ -1.63
SFTPDP35247 MIR6886-201ENST00000619864 61 ntBASIC4.84□□□□□ -1.63
SFTPDP35247 MIR6837-201ENST00000620884 64 ntBASIC4.84□□□□□ -1.63
SFTPDP35247 RNU6-368P-201ENST00000620928 107 ntBASIC4.84□□□□□ -1.63
SFTPDP35247 RNU6-538P-201ENST00000622329 107 ntBASIC4.84□□□□□ -1.63
SFTPDP35247 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.84□□□□□ -1.63
SFTPDP35247 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SFTPDP35247 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SFTPDP35247 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SFTPDP35247 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SFTPDP35247 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SFTPDP35247 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SFTPDP35247 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SFTPDP35247 AP005435.3-201ENST00000531260 3198 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SFTPDP35247 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SFTPDP35247 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPDP35247 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
SFTPDP35247 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SFTPDP35247 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPDP35247 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPDP35247 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SFTPDP35247 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
SFTPDP35247 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPDP35247 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPDP35247 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPDP35247 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPDP35247 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPDP35247 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.83□□□□□ -1.64
SFTPDP35247 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.83□□□□□ -1.64
SFTPDP35247 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
SFTPDP35247 DBIP1-201ENST00000401435 260 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 RNA5SP487-201ENST00000410186 122 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 RANP4-201ENST00000413361 655 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 AC079809.1-201ENST00000415468 276 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 MTND4LP13-201ENST00000425022 298 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 RPL17P35-201ENST00000432217 549 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.83□□□□□ -1.64
SFTPDP35247 AC093716.1-201ENST00000435923 377 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 GAPDHP25-201ENST00000447061 1001 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 AL606490.1-201ENST00000452266 765 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 CYCSP53-201ENST00000455540 265 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 RPL5P13-201ENST00000462840 709 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 UBA52P7-201ENST00000486088 380 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 IGBP1P4-201ENST00000503202 879 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.83□□□□□ -1.64
SFTPDP35247 BTG4P1-201ENST00000510421 183 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.83□□□□□ -1.64
SFTPDP35247 RNU6-941P-201ENST00000516346 108 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 AC126177.5-201ENST00000549599 178 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 RPL10P14-201ENST00000565265 298 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 MIR3908-201ENST00000579798 126 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 AL450270.1-201ENST00000606160 391 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 AC019131.2-201ENST00000609071 870 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 AC244107.2-201ENST00000611773 76 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 AC025016.1-201ENST00000616746 682 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.83□□□□□ -1.64
SFTPDP35247 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.83□□□□□ -1.64
SFTPDP35247 AC074101.1-201ENST00000637861 241 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 CASC19-264ENST00000641912 1184 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPDP35247 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPDP35247 AC006206.1-201ENST00000544842 3387 ntBASIC4.83□□□□□ -1.64
SFTPDP35247 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPDP35247 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPDP35247 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPDP35247 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPDP35247 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.83□□□□□ -1.64
SFTPDP35247 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPDP35247 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPDP35247 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.82□□□□□ -1.64
SFTPDP35247 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SFTPDP35247 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
SFTPDP35247 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
SFTPDP35247 AC107021.2-201ENST00000567714 2095 ntBASIC4.82□□□□□ -1.64
SFTPDP35247 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.82□□□□□ -1.64
SFTPDP35247 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SFTPDP35247 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms