Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.64□□□□□ -1.51
CD40P25942 AC005962.2-201ENST00000611427 652 ntBASIC5.64□□□□□ -1.51
CD40P25942 MIR7109-201ENST00000613748 65 ntBASIC5.64□□□□□ -1.51
CD40P25942 MIR6806-201ENST00000622141 64 ntBASIC5.64□□□□□ -1.51
CD40P25942 AL392088.2-201ENST00000637607 285 ntBASIC5.64□□□□□ -1.51
CD40P25942 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CD40P25942 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.64□□□□□ -1.51
CD40P25942 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CD40P25942 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CD40P25942 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.64□□□□□ -1.51
CD40P25942 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 AP003486.1-201ENST00000525716 3994 ntBASIC5.64□□□□□ -1.51
CD40P25942 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 AC011447.7-201ENST00000624228 1590 ntBASIC5.63□□□□□ -1.51
CD40P25942 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.63□□□□□ -1.51
CD40P25942 MRRFP1-201ENST00000435941 1675 ntBASIC5.63□□□□□ -1.51
CD40P25942 MAK-202ENST00000354489 3941 ntTSL 5 BASIC5.63□□□□□ -1.51
CD40P25942 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CD40P25942 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.63□□□□□ -1.51
CD40P25942 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.63□□□□□ -1.51
CD40P25942 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC5.63□□□□□ -1.51
CD40P25942 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 AL672167.1-206ENST00000356293 943 ntBASIC5.63□□□□□ -1.51
CD40P25942 RNU6-500P-201ENST00000362349 107 ntBASIC5.63□□□□□ -1.51
CD40P25942 RNU6-582P-201ENST00000362989 107 ntBASIC5.63□□□□□ -1.51
CD40P25942 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.63□□□□□ -1.51
CD40P25942 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.63□□□□□ -1.51
CD40P25942 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 RNU1-46P-201ENST00000384425 164 ntBASIC5.63□□□□□ -1.51
CD40P25942 SNORA51.12-201ENST00000384448 134 ntBASIC5.63□□□□□ -1.51
CD40P25942 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
CD40P25942 RNU2-6P-201ENST00000411404 190 ntBASIC5.63□□□□□ -1.51
CD40P25942 RPL7P8-201ENST00000411964 730 ntBASIC5.63□□□□□ -1.51
CD40P25942 AC017035.1-201ENST00000411999 1115 ntBASIC5.63□□□□□ -1.51
CD40P25942 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.63□□□□□ -1.51
CD40P25942 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.63□□□□□ -1.51
CD40P25942 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.63□□□□□ -1.51
CD40P25942 DYNLL1P7-201ENST00000429273 258 ntBASIC5.63□□□□□ -1.51
CD40P25942 AC124944.2-201ENST00000429866 1242 ntBASIC5.63□□□□□ -1.51
CD40P25942 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.63□□□□□ -1.51
CD40P25942 AC003989.1-201ENST00000434569 565 ntBASIC5.63□□□□□ -1.51
CD40P25942 MTND4P6-201ENST00000438297 472 ntBASIC5.63□□□□□ -1.51
CD40P25942 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.63□□□□□ -1.51
CD40P25942 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.63□□□□□ -1.51
CD40P25942 COX4I1P2-201ENST00000447446 547 ntBASIC5.63□□□□□ -1.51
CD40P25942 DNAJB5P1-201ENST00000454004 806 ntBASIC5.63□□□□□ -1.51
CD40P25942 AC118758.1-202ENST00000454719 225 ntBASIC5.63□□□□□ -1.51
CD40P25942 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.63□□□□□ -1.51
CD40P25942 RPS4XP12-201ENST00000461747 709 ntBASIC5.63□□□□□ -1.51
CD40P25942 AC010307.1-201ENST00000467206 836 ntBASIC5.63□□□□□ -1.51
CD40P25942 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.63□□□□□ -1.51
CD40P25942 AC104689.1-201ENST00000473356 768 ntBASIC5.63□□□□□ -1.51
CD40P25942 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.63□□□□□ -1.51
CD40P25942 AC063943.2-201ENST00000495697 534 ntBASIC5.63□□□□□ -1.51
CD40P25942 ARL4AP1-201ENST00000503220 705 ntBASIC5.63□□□□□ -1.51
CD40P25942 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.63□□□□□ -1.51
CD40P25942 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.63□□□□□ -1.51
CD40P25942 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.63□□□□□ -1.51
CD40P25942 AC122718.2-201ENST00000505325 591 ntBASIC5.63□□□□□ -1.51
CD40P25942 AC113367.2-201ENST00000505749 160 ntBASIC5.63□□□□□ -1.51
CD40P25942 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.63□□□□□ -1.51
CD40P25942 LTV1P1-201ENST00000510683 1237 ntBASIC5.63□□□□□ -1.51
CD40P25942 AC106800.2-201ENST00000514009 1103 ntBASIC5.63□□□□□ -1.51
CD40P25942 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.63□□□□□ -1.51
CD40P25942 CYCSP25-201ENST00000525280 316 ntBASIC5.63□□□□□ -1.51
CD40P25942 AL133399.1-201ENST00000527476 298 ntBASIC5.63□□□□□ -1.51
CD40P25942 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.63□□□□□ -1.51
CD40P25942 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.63□□□□□ -1.51
CD40P25942 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.63□□□□□ -1.51
CD40P25942 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.63□□□□□ -1.51
CD40P25942 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.63□□□□□ -1.51
CD40P25942 AC006362.1-201ENST00000567392 174 ntBASIC5.63□□□□□ -1.51
CD40P25942 AGGF1P4-201ENST00000568249 801 ntBASIC5.63□□□□□ -1.51
CD40P25942 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC5.63□□□□□ -1.51
CD40P25942 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.63□□□□□ -1.51
CD40P25942 AL589863.1-201ENST00000595383 631 ntBASIC5.63□□□□□ -1.51
CD40P25942 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.63□□□□□ -1.51
CD40P25942 AC004492.1-201ENST00000607036 742 ntBASIC5.63□□□□□ -1.51
CD40P25942 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.63□□□□□ -1.51
CD40P25942 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC5.63□□□□□ -1.51
CD40P25942 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms