Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.58□□□□□ -1.2
RFX1P22670 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC7.58□□□□□ -1.2
RFX1P22670 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RFX1P22670 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.58□□□□□ -1.2
RFX1P22670 AL389915.1-201ENST00000422463 466 ntBASIC7.58□□□□□ -1.2
RFX1P22670 VN1R20P-201ENST00000425215 966 ntBASIC7.58□□□□□ -1.2
RFX1P22670 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.58□□□□□ -1.2
RFX1P22670 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.58□□□□□ -1.2
RFX1P22670 RPL3P11-201ENST00000434028 1146 ntBASIC7.58□□□□□ -1.2
RFX1P22670 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC7.58□□□□□ -1.2
RFX1P22670 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC7.58□□□□□ -1.2
RFX1P22670 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.58□□□□□ -1.2
RFX1P22670 RPS18P1-201ENST00000447840 458 ntBASIC7.58□□□□□ -1.2
RFX1P22670 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC7.58□□□□□ -1.2
RFX1P22670 HCG17-214ENST00000453558 732 ntTSL 5 BASIC7.58□□□□□ -1.2
RFX1P22670 BZW1P1-201ENST00000454901 1240 ntBASIC7.58□□□□□ -1.2
RFX1P22670 AL359385.1-201ENST00000456509 365 ntBASIC7.58□□□□□ -1.2
RFX1P22670 NDUFA5P5-201ENST00000468361 342 ntBASIC7.58□□□□□ -1.2
RFX1P22670 RN7SL350P-201ENST00000492591 299 ntBASIC7.58□□□□□ -1.2
RFX1P22670 AC011352.3-201ENST00000505162 593 ntBASIC7.58□□□□□ -1.2
RFX1P22670 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
RFX1P22670 SCARNA6-201ENST00000515982 265 ntBASIC7.58□□□□□ -1.2
RFX1P22670 RNA5SP216-201ENST00000516111 123 ntBASIC7.58□□□□□ -1.2
RFX1P22670 RNY4P37-201ENST00000516225 96 ntBASIC7.58□□□□□ -1.2
RFX1P22670 RGS5-218ENST00000526176 574 ntTSL 4 BASIC7.58□□□□□ -1.2
RFX1P22670 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.58□□□□□ -1.2
RFX1P22670 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.58□□□□□ -1.2
RFX1P22670 NPM1P47-201ENST00000560843 856 ntBASIC7.58□□□□□ -1.2
RFX1P22670 AC093519.1-201ENST00000566109 298 ntBASIC7.58□□□□□ -1.2
RFX1P22670 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC7.58□□□□□ -1.2
RFX1P22670 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC7.58□□□□□ -1.2
RFX1P22670 MIR6885-201ENST00000612241 66 ntBASIC7.58□□□□□ -1.2
RFX1P22670 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
RFX1P22670 U1.31-201ENST00000620022 160 ntBASIC7.58□□□□□ -1.2
RFX1P22670 AC012629.3-201ENST00000623397 328 ntBASIC7.58□□□□□ -1.2
RFX1P22670 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.58□□□□□ -1.2
RFX1P22670 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.58□□□□□ -1.2
RFX1P22670 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.58□□□□□ -1.2
RFX1P22670 AL356585.10-201ENST00000641883 123 ntBASIC7.58□□□□□ -1.2
RFX1P22670 AC034111.1-201ENST00000562143 3770 ntBASIC7.58□□□□□ -1.2
RFX1P22670 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RFX1P22670 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.58□□□□□ -1.2
RFX1P22670 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
RFX1P22670 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RFX1P22670 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
RFX1P22670 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
RFX1P22670 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.58□□□□□ -1.2
RFX1P22670 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RFX1P22670 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
RFX1P22670 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
RFX1P22670 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RFX1P22670 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
RFX1P22670 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RFX1P22670 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.57□□□□□ -1.2
RFX1P22670 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RFX1P22670 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RFX1P22670 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RFX1P22670 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.57□□□□□ -1.2
RFX1P22670 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RFX1P22670 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.57□□□□□ -1.2
RFX1P22670 Y_RNA.25-201ENST00000362528 102 ntBASIC7.57□□□□□ -1.2
RFX1P22670 RNU6-433P-201ENST00000363216 104 ntBASIC7.57□□□□□ -1.2
RFX1P22670 RNU6-216P-201ENST00000363282 104 ntBASIC7.57□□□□□ -1.2
RFX1P22670 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RFX1P22670 MIR506-201ENST00000384998 124 ntBASIC7.57□□□□□ -1.2
RFX1P22670 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.57□□□□□ -1.2
RFX1P22670 RNU2-6P-201ENST00000411404 190 ntBASIC7.57□□□□□ -1.2
RFX1P22670 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.57□□□□□ -1.2
RFX1P22670 VDAC1P10-201ENST00000416715 891 ntBASIC7.57□□□□□ -1.2
RFX1P22670 AC092647.1-201ENST00000420654 287 ntBASIC7.57□□□□□ -1.2
RFX1P22670 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC7.57□□□□□ -1.2
RFX1P22670 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RFX1P22670 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC7.57□□□□□ -1.2
RFX1P22670 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RFX1P22670 MTND1P2-201ENST00000430604 821 ntBASIC7.57□□□□□ -1.2
RFX1P22670 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
RFX1P22670 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC7.57□□□□□ -1.2
RFX1P22670 EEF1E1P1-201ENST00000446998 430 ntBASIC7.57□□□□□ -1.2
RFX1P22670 AC003071.1-201ENST00000451219 789 ntBASIC7.57□□□□□ -1.2
RFX1P22670 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC7.57□□□□□ -1.2
RFX1P22670 AL034369.1-201ENST00000453808 477 ntBASIC7.57□□□□□ -1.2
RFX1P22670 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.57□□□□□ -1.2
RFX1P22670 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC7.57□□□□□ -1.2
RFX1P22670 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC7.57□□□□□ -1.2
RFX1P22670 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.57□□□□□ -1.2
RFX1P22670 AC026254.2-201ENST00000475295 371 ntBASIC7.57□□□□□ -1.2
RFX1P22670 RPL23AP8-201ENST00000479812 475 ntBASIC7.57□□□□□ -1.2
RFX1P22670 RPL7P6-201ENST00000480903 738 ntBASIC7.57□□□□□ -1.2
RFX1P22670 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC7.57□□□□□ -1.2
RFX1P22670 RN7SL655P-201ENST00000486087 298 ntBASIC7.57□□□□□ -1.2
RFX1P22670 HMGN2P25-201ENST00000486956 268 ntBASIC7.57□□□□□ -1.2
RFX1P22670 OR4G11P-201ENST00000492842 939 ntBASIC7.57□□□□□ -1.2
RFX1P22670 RPL19P11-201ENST00000495944 589 ntBASIC7.57□□□□□ -1.2
RFX1P22670 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC7.57□□□□□ -1.2
RFX1P22670 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.57□□□□□ -1.2
RFX1P22670 MINOS1P4-201ENST00000515470 318 ntBASIC7.57□□□□□ -1.2
RFX1P22670 RNU6-506P-201ENST00000516553 94 ntBASIC7.57□□□□□ -1.2
RFX1P22670 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.57□□□□□ -1.2
RFX1P22670 OR5M6P-201ENST00000530227 937 ntBASIC7.57□□□□□ -1.2
RFX1P22670 AC125612.1-201ENST00000547580 377 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms