Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH3P22223 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH3P22223 AC105399.1-202ENST00000447303 205 ntBASIC5.3□□□□□ -1.56
CDH3P22223 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH3P22223 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.3□□□□□ -1.56
CDH3P22223 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH3P22223 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH3P22223 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH3P22223 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH3P22223 RN7SKP253-201ENST00000516424 309 ntBASIC5.3□□□□□ -1.56
CDH3P22223 SCARNA16.4-201ENST00000516956 187 ntBASIC5.3□□□□□ -1.56
CDH3P22223 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH3P22223 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.3□□□□□ -1.56
CDH3P22223 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH3P22223 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.3□□□□□ -1.56
CDH3P22223 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH3P22223 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH3P22223 AP005403.1-201ENST00000579720 229 ntBASIC5.3□□□□□ -1.56
CDH3P22223 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH3P22223 AC000068.2-201ENST00000608816 460 ntBASIC5.3□□□□□ -1.56
CDH3P22223 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CDH3P22223 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH3P22223 CASC19-264ENST00000641912 1184 ntBASIC5.3□□□□□ -1.56
CDH3P22223 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH3P22223 AC007938.2-201ENST00000604666 2634 ntBASIC5.3□□□□□ -1.56
CDH3P22223 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH3P22223 ADAM5-202ENST00000399789 1942 ntBASIC5.3□□□□□ -1.56
CDH3P22223 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH3P22223 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH3P22223 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH3P22223 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH3P22223 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
CDH3P22223 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH3P22223 CR788268.1-201ENST00000603931 1809 ntBASIC5.3□□□□□ -1.56
CDH3P22223 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH3P22223 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH3P22223 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH3P22223 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.29□□□□□ -1.56
CDH3P22223 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH3P22223 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CDH3P22223 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH3P22223 MIR7-1-201ENST00000384871 110 ntBASIC5.29□□□□□ -1.56
CDH3P22223 RPL35AP24-201ENST00000413846 330 ntBASIC5.29□□□□□ -1.56
CDH3P22223 Z68694.1-201ENST00000413929 841 ntBASIC5.29□□□□□ -1.56
CDH3P22223 AC007161.1-204ENST00000423039 460 ntBASIC5.29□□□□□ -1.56
CDH3P22223 AJ239321.1-201ENST00000424255 564 ntBASIC5.29□□□□□ -1.56
CDH3P22223 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH3P22223 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH3P22223 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH3P22223 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH3P22223 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH3P22223 MTND6P2-201ENST00000512226 524 ntBASIC5.29□□□□□ -1.56
CDH3P22223 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH3P22223 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.29□□□□□ -1.56
CDH3P22223 GAPDHP62-201ENST00000515313 990 ntBASIC5.29□□□□□ -1.56
CDH3P22223 NPM1P52-201ENST00000518264 846 ntBASIC5.29□□□□□ -1.56
CDH3P22223 AC018442.3-201ENST00000523025 183 ntBASIC5.29□□□□□ -1.56
CDH3P22223 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH3P22223 OR5AM1P-201ENST00000532136 1032 ntBASIC5.29□□□□□ -1.56
CDH3P22223 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH3P22223 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH3P22223 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH3P22223 AC004825.1-201ENST00000555068 586 ntBASIC5.29□□□□□ -1.56
CDH3P22223 AL121839.1-201ENST00000556233 1185 ntBASIC5.29□□□□□ -1.56
CDH3P22223 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH3P22223 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH3P22223 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH3P22223 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.29□□□□□ -1.56
CDH3P22223 IMMP1LP3-201ENST00000604197 224 ntBASIC5.29□□□□□ -1.56
CDH3P22223 AL590410.1-201ENST00000617925 333 ntBASIC5.29□□□□□ -1.56
CDH3P22223 AC008115.4-201ENST00000619780 775 ntBASIC5.29□□□□□ -1.56
CDH3P22223 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH3P22223 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH3P22223 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
CDH3P22223 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
CDH3P22223 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CDH3P22223 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH3P22223 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH3P22223 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH3P22223 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH3P22223 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH3P22223 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CDH3P22223 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH3P22223 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH3P22223 AP001642.1-201ENST00000624727 2117 ntBASIC5.29□□□□□ -1.56
CDH3P22223 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH3P22223 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH3P22223 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH3P22223 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH3P22223 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH3P22223 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH3P22223 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH3P22223 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH3P22223 RNU4-44P-201ENST00000363050 141 ntBASIC5.28□□□□□ -1.56
CDH3P22223 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CDH3P22223 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH3P22223 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CDH3P22223 MIR1286-201ENST00000408112 78 ntBASIC5.28□□□□□ -1.56
CDH3P22223 RPSAP35-201ENST00000413753 818 ntBASIC5.28□□□□□ -1.56
CDH3P22223 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms