Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CFTRP13569 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC8.35□□□□□ -1.07
CFTRP13569 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC8.35□□□□□ -1.07
CFTRP13569 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CFTRP13569 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
CFTRP13569 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CFTRP13569 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC8.35□□□□□ -1.07
CFTRP13569 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CFTRP13569 COX6CP13-201ENST00000428703 226 ntBASIC8.35□□□□□ -1.07
CFTRP13569 AC108463.1-201ENST00000450258 347 ntBASIC8.35□□□□□ -1.07
CFTRP13569 RPL23AP24-201ENST00000458203 385 ntBASIC8.35□□□□□ -1.07
CFTRP13569 FPGT-203ENST00000467578 601 ntTSL 2 BASIC8.35□□□□□ -1.07
CFTRP13569 RPL36AP41-201ENST00000493820 306 ntBASIC8.35□□□□□ -1.07
CFTRP13569 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
CFTRP13569 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC8.35□□□□□ -1.07
CFTRP13569 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC8.35□□□□□ -1.07
CFTRP13569 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC8.35□□□□□ -1.07
CFTRP13569 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CFTRP13569 LDHA-225ENST00000625635 141 ntTSL 5 BASIC8.35□□□□□ -1.07
CFTRP13569 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
CFTRP13569 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CFTRP13569 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CFTRP13569 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC8.35□□□□□ -1.07
CFTRP13569 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC8.35□□□□□ -1.07
CFTRP13569 CASC19-243ENST00000641588 1546 ntBASIC8.35□□□□□ -1.07
CFTRP13569 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CFTRP13569 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
CFTRP13569 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC8.34□□□□□ -1.07
CFTRP13569 RNU6ATAC34P-201ENST00000408879 121 ntBASIC8.34□□□□□ -1.07
CFTRP13569 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC8.34□□□□□ -1.07
CFTRP13569 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC8.34□□□□□ -1.07
CFTRP13569 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CFTRP13569 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC8.34□□□□□ -1.07
CFTRP13569 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CFTRP13569 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CFTRP13569 ZFRP1-201ENST00000457579 2970 ntBASIC8.34□□□□□ -1.07
CFTRP13569 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.07
CFTRP13569 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.34□□□□□ -1.08
CFTRP13569 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
CFTRP13569 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
CFTRP13569 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
CFTRP13569 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CFTRP13569 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC8.33□□□□□ -1.08
CFTRP13569 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CFTRP13569 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC8.33□□□□□ -1.08
CFTRP13569 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC8.33□□□□□ -1.08
CFTRP13569 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC8.33□□□□□ -1.08
CFTRP13569 CYP4F29P-201ENST00000420685 446 ntBASIC8.33□□□□□ -1.08
CFTRP13569 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC8.33□□□□□ -1.08
CFTRP13569 GAPDHP14-201ENST00000450472 937 ntBASIC8.33□□□□□ -1.08
CFTRP13569 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CFTRP13569 MTND4LP2-201ENST00000502312 285 ntBASIC8.33□□□□□ -1.08
CFTRP13569 PPM1AP1-201ENST00000502740 1135 ntBASIC8.33□□□□□ -1.08
CFTRP13569 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC8.33□□□□□ -1.08
CFTRP13569 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC8.33□□□□□ -1.08
CFTRP13569 AC002044.3-201ENST00000623314 541 ntBASIC8.33□□□□□ -1.08
CFTRP13569 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC8.33□□□□□ -1.08
CFTRP13569 AC133552.1-201ENST00000569988 4007 ntBASIC8.33□□□□□ -1.08
CFTRP13569 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CFTRP13569 AC002525.1-201ENST00000624392 1622 ntBASIC8.33□□□□□ -1.08
CFTRP13569 SMG1P7-201ENST00000565246 2704 ntBASIC8.33□□□□□ -1.08
CFTRP13569 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8.33□□□□□ -1.08
CFTRP13569 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
CFTRP13569 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC8.33□□□□□ -1.08
CFTRP13569 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC8.33□□□□□ -1.08
CFTRP13569 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC8.33□□□□□ -1.08
CFTRP13569 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CFTRP13569 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CFTRP13569 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CFTRP13569 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CFTRP13569 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC8.32□□□□□ -1.08
CFTRP13569 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC8.32□□□□□ -1.08
CFTRP13569 AL162591.2-201ENST00000449634 317 ntBASIC8.32□□□□□ -1.08
CFTRP13569 AC007016.1-201ENST00000512110 244 ntBASIC8.32□□□□□ -1.08
CFTRP13569 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC8.32□□□□□ -1.08
CFTRP13569 AC026688.1-201ENST00000520639 1168 ntBASIC8.32□□□□□ -1.08
CFTRP13569 MIR92B-201ENST00000607575 96 ntBASIC8.32□□□□□ -1.08
CFTRP13569 AL049794.2-201ENST00000616301 365 ntBASIC8.32□□□□□ -1.08
CFTRP13569 OR8B1P-202ENST00000641132 1178 ntBASIC8.32□□□□□ -1.08
CFTRP13569 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CFTRP13569 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CFTRP13569 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CFTRP13569 AC025574.1-201ENST00000554784 1653 ntBASIC8.32□□□□□ -1.08
CFTRP13569 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CFTRP13569 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CFTRP13569 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
CFTRP13569 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CFTRP13569 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CFTRP13569 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
CFTRP13569 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CFTRP13569 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC8.32□□□□□ -1.08
CFTRP13569 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
CFTRP13569 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC8.32□□□□□ -1.08
CFTRP13569 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
CFTRP13569 AC140479.3-201ENST00000418944 1126 ntBASIC8.32□□□□□ -1.08
CFTRP13569 AC099670.2-201ENST00000435130 321 ntBASIC8.32□□□□□ -1.08
CFTRP13569 AC091180.1-201ENST00000462104 372 ntBASIC8.32□□□□□ -1.08
CFTRP13569 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC8.32□□□□□ -1.08
CFTRP13569 AC091167.1-201ENST00000492017 396 ntBASIC8.32□□□□□ -1.08
CFTRP13569 AC020593.1-201ENST00000507399 299 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms