Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
PCNAP12004 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCNAP12004 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCNAP12004 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCNAP12004 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCNAP12004 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCNAP12004 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
PCNAP12004 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCNAP12004 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.39□□□□□ -1.55
PCNAP12004 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCNAP12004 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.39□□□□□ -1.55
PCNAP12004 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCNAP12004 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PCNAP12004 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
PCNAP12004 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCNAP12004 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCNAP12004 AP000568.1-201ENST00000282964 442 ntBASIC5.39□□□□□ -1.55
PCNAP12004 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCNAP12004 RNA5SP394-201ENST00000364216 119 ntBASIC5.39□□□□□ -1.55
PCNAP12004 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.39□□□□□ -1.55
PCNAP12004 RNU6-925P-201ENST00000384629 104 ntBASIC5.39□□□□□ -1.55
PCNAP12004 MIR621-201ENST00000384919 96 ntBASIC5.39□□□□□ -1.55
PCNAP12004 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PCNAP12004 U3.28-201ENST00000391249 210 ntBASIC5.39□□□□□ -1.55
PCNAP12004 RNU4-27P-201ENST00000410889 139 ntBASIC5.39□□□□□ -1.55
PCNAP12004 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.39□□□□□ -1.55
PCNAP12004 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCNAP12004 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.39□□□□□ -1.55
PCNAP12004 AC006335.2-201ENST00000437993 330 ntBASIC5.39□□□□□ -1.55
PCNAP12004 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.39□□□□□ -1.55
PCNAP12004 MTCYBP21-201ENST00000443300 1113 ntBASIC5.39□□□□□ -1.55
PCNAP12004 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.39□□□□□ -1.55
PCNAP12004 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.39□□□□□ -1.55
PCNAP12004 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.39□□□□□ -1.55
PCNAP12004 SNORD125-201ENST00000459538 96 ntBASIC5.39□□□□□ -1.55
PCNAP12004 UBFD1P1-201ENST00000473259 814 ntBASIC5.39□□□□□ -1.55
PCNAP12004 AC069304.1-201ENST00000491593 704 ntBASIC5.39□□□□□ -1.55
PCNAP12004 AC023424.1-201ENST00000496058 459 ntBASIC5.39□□□□□ -1.55
PCNAP12004 RPS17P5-201ENST00000498293 408 ntBASIC5.39□□□□□ -1.55
PCNAP12004 AC093801.2-201ENST00000503966 1050 ntBASIC5.39□□□□□ -1.55
PCNAP12004 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.39□□□□□ -1.55
PCNAP12004 RNU6-615P-201ENST00000516065 106 ntBASIC5.39□□□□□ -1.55
PCNAP12004 RNU6-513P-201ENST00000516104 104 ntBASIC5.39□□□□□ -1.55
PCNAP12004 RN7SKP34-201ENST00000516142 244 ntBASIC5.39□□□□□ -1.55
PCNAP12004 TMEM97P2-201ENST00000517841 403 ntBASIC5.39□□□□□ -1.55
PCNAP12004 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
PCNAP12004 MRPS16P1-201ENST00000523462 412 ntBASIC5.39□□□□□ -1.55
PCNAP12004 HAUS1P3-201ENST00000523909 662 ntBASIC5.39□□□□□ -1.55
PCNAP12004 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.39□□□□□ -1.55
PCNAP12004 SOX5P1-201ENST00000524155 1127 ntBASIC5.39□□□□□ -1.55
PCNAP12004 OR4A17P-201ENST00000526032 904 ntBASIC5.39□□□□□ -1.55
PCNAP12004 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.39□□□□□ -1.55
PCNAP12004 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PCNAP12004 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.39□□□□□ -1.55
PCNAP12004 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.39□□□□□ -1.55
PCNAP12004 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.39□□□□□ -1.55
PCNAP12004 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.39□□□□□ -1.55
PCNAP12004 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCNAP12004 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.39□□□□□ -1.55
PCNAP12004 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.39□□□□□ -1.55
PCNAP12004 MTCO2P22-201ENST00000603246 681 ntBASIC5.39□□□□□ -1.55
PCNAP12004 AC108865.2-201ENST00000606881 432 ntBASIC5.39□□□□□ -1.55
PCNAP12004 AL445528.2-201ENST00000620582 470 ntBASIC5.39□□□□□ -1.55
PCNAP12004 FRG1DP-201ENST00000635586 771 ntBASIC5.39□□□□□ -1.55
PCNAP12004 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCNAP12004 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCNAP12004 AC107021.2-201ENST00000567714 2095 ntBASIC5.39□□□□□ -1.55
PCNAP12004 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PCNAP12004 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
PCNAP12004 SRRM1P3-201ENST00000426911 2678 ntBASIC5.39□□□□□ -1.55
PCNAP12004 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PCNAP12004 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCNAP12004 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCNAP12004 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCNAP12004 MT-RNR2-201ENST00000387347 1559 ntBASIC5.38□□□□□ -1.55
PCNAP12004 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCNAP12004 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.38□□□□□ -1.55
PCNAP12004 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCNAP12004 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
PCNAP12004 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PCNAP12004 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
PCNAP12004 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
PCNAP12004 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCNAP12004 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCNAP12004 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.38□□□□□ -1.55
PCNAP12004 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCNAP12004 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
PCNAP12004 AC092681.1-201ENST00000297369 291 ntBASIC5.38□□□□□ -1.55
PCNAP12004 RNU6-31P-201ENST00000384388 108 ntBASIC5.38□□□□□ -1.55
PCNAP12004 OOSP1-201ENST00000398992 1270 ntBASIC5.38□□□□□ -1.55
PCNAP12004 AL009179.1-201ENST00000406085 265 ntBASIC5.38□□□□□ -1.55
PCNAP12004 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.38□□□□□ -1.55
PCNAP12004 IPPKP1-201ENST00000422501 768 ntBASIC5.38□□□□□ -1.55
PCNAP12004 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PCNAP12004 HSPE1P16-201ENST00000426640 348 ntBASIC5.38□□□□□ -1.55
PCNAP12004 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCNAP12004 AL512637.2-201ENST00000431287 1256 ntBASIC5.38□□□□□ -1.55
PCNAP12004 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.38□□□□□ -1.55
PCNAP12004 AL359265.1-201ENST00000440296 795 ntBASIC5.38□□□□□ -1.55
PCNAP12004 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms