Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
CTSDP07339 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.2□□□□□ -1.74
CTSDP07339 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.2□□□□□ -1.74
CTSDP07339 SLC35E1P1-201ENST00000419313 864 ntBASIC4.2□□□□□ -1.74
CTSDP07339 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CTSDP07339 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.2□□□□□ -1.74
CTSDP07339 TMX2P1-201ENST00000436507 708 ntBASIC4.2□□□□□ -1.74
CTSDP07339 TXNP5-201ENST00000441043 315 ntBASIC4.2□□□□□ -1.74
CTSDP07339 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.2□□□□□ -1.74
CTSDP07339 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.2□□□□□ -1.74
CTSDP07339 RN7SL51P-201ENST00000468230 285 ntBASIC4.2□□□□□ -1.74
CTSDP07339 AC108751.2-201ENST00000469993 231 ntBASIC4.2□□□□□ -1.74
CTSDP07339 RNA5SP464-201ENST00000516251 108 ntBASIC4.2□□□□□ -1.74
CTSDP07339 HMGB1P19-201ENST00000517578 577 ntBASIC4.2□□□□□ -1.74
CTSDP07339 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.2□□□□□ -1.74
CTSDP07339 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.2□□□□□ -1.74
CTSDP07339 AC027544.3-201ENST00000535082 757 ntBASIC4.2□□□□□ -1.74
CTSDP07339 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CTSDP07339 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.2□□□□□ -1.74
CTSDP07339 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.2□□□□□ -1.74
CTSDP07339 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.2□□□□□ -1.74
CTSDP07339 AC015720.2-201ENST00000567709 334 ntBASIC4.2□□□□□ -1.74
CTSDP07339 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.2□□□□□ -1.74
CTSDP07339 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.2□□□□□ -1.74
CTSDP07339 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.2□□□□□ -1.74
CTSDP07339 AC026124.2-201ENST00000621847 656 ntBASIC4.2□□□□□ -1.74
CTSDP07339 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.2□□□□□ -1.74
CTSDP07339 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.2□□□□□ -1.74
CTSDP07339 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CTSDP07339 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.2□□□□□ -1.74
CTSDP07339 AC005332.5-201ENST00000591222 2919 ntBASIC4.2□□□□□ -1.74
CTSDP07339 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTSDP07339 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.2□□□□□ -1.74
CTSDP07339 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CTSDP07339 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.19□□□□□ -1.74
CTSDP07339 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CTSDP07339 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CTSDP07339 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
CTSDP07339 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.19□□□□□ -1.74
CTSDP07339 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CTSDP07339 AL513548.1-201ENST00000562904 1724 ntBASIC4.19□□□□□ -1.74
CTSDP07339 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTSDP07339 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CTSDP07339 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CTSDP07339 AL512422.1-201ENST00000407033 553 ntBASIC4.19□□□□□ -1.74
CTSDP07339 RN7SKP199-201ENST00000410325 305 ntBASIC4.19□□□□□ -1.74
CTSDP07339 RNA5SP178-201ENST00000410380 128 ntBASIC4.19□□□□□ -1.74
CTSDP07339 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.19□□□□□ -1.74
CTSDP07339 QRSL1P2-201ENST00000418582 964 ntBASIC4.19□□□□□ -1.74
CTSDP07339 AL358176.3-201ENST00000420757 454 ntBASIC4.19□□□□□ -1.74
CTSDP07339 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CTSDP07339 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CTSDP07339 RPS6P2-201ENST00000454208 705 ntBASIC4.19□□□□□ -1.74
CTSDP07339 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.19□□□□□ -1.74
CTSDP07339 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.19□□□□□ -1.74
CTSDP07339 RN7SL515P-201ENST00000463999 297 ntBASIC4.19□□□□□ -1.74
CTSDP07339 RN7SL443P-201ENST00000464331 290 ntBASIC4.19□□□□□ -1.74
CTSDP07339 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CTSDP07339 AC104109.1-201ENST00000498563 436 ntBASIC4.19□□□□□ -1.74
CTSDP07339 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.19□□□□□ -1.74
CTSDP07339 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.19□□□□□ -1.74
CTSDP07339 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CTSDP07339 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CTSDP07339 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.19□□□□□ -1.74
CTSDP07339 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.19□□□□□ -1.74
CTSDP07339 AP005432.2-201ENST00000608162 586 ntBASIC4.19□□□□□ -1.74
CTSDP07339 AC126175.1-201ENST00000617041 758 ntBASIC4.19□□□□□ -1.74
CTSDP07339 AL691477.1-201ENST00000624398 162 ntBASIC4.19□□□□□ -1.74
CTSDP07339 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.19□□□□□ -1.74
CTSDP07339 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTSDP07339 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTSDP07339 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTSDP07339 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTSDP07339 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.19□□□□□ -1.74
CTSDP07339 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTSDP07339 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTSDP07339 AL359922.3-201ENST00000624779 1670 ntBASIC4.19□□□□□ -1.74
CTSDP07339 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.19□□□□□ -1.74
CTSDP07339 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CTSDP07339 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTSDP07339 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTSDP07339 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CTSDP07339 DDX18P5-201ENST00000534547 1306 ntBASIC4.19□□□□□ -1.74
CTSDP07339 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.19□□□□□ -1.74
CTSDP07339 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTSDP07339 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CTSDP07339 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.18□□□□□ -1.74
CTSDP07339 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CTSDP07339 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTSDP07339 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CTSDP07339 KARSP1-201ENST00000451871 1752 ntBASIC4.18□□□□□ -1.74
CTSDP07339 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTSDP07339 AC120338.1-201ENST00000625074 1541 ntBASIC4.18□□□□□ -1.74
CTSDP07339 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CTSDP07339 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.18□□□□□ -1.74
CTSDP07339 RNA5SP319-201ENST00000362768 119 ntBASIC4.18□□□□□ -1.74
CTSDP07339 SNORA73.1-201ENST00000363107 205 ntBASIC4.18□□□□□ -1.74
CTSDP07339 RNA5SP335-201ENST00000363817 110 ntBASIC4.18□□□□□ -1.74
CTSDP07339 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CTSDP07339 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms