Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MIR23A-201ENST00000385245 73 ntBASIC6.01□□□□□ -1.45
COL1A1P02452 GLULP6-201ENST00000399502 913 ntBASIC6.01□□□□□ -1.45
COL1A1P02452 CNOT7P1-201ENST00000429006 852 ntBASIC6.01□□□□□ -1.45
COL1A1P02452 AC068287.1-201ENST00000430283 295 ntBASIC6.01□□□□□ -1.45
COL1A1P02452 SCAND3P1-201ENST00000439854 1060 ntBASIC6.01□□□□□ -1.45
COL1A1P02452 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.01□□□□□ -1.45
COL1A1P02452 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.01□□□□□ -1.45
COL1A1P02452 IGKV2D-10-201ENST00000520194 281 ntBASIC6.01□□□□□ -1.45
COL1A1P02452 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.01□□□□□ -1.45
COL1A1P02452 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.01□□□□□ -1.45
COL1A1P02452 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.01□□□□□ -1.45
COL1A1P02452 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.01□□□□□ -1.45
COL1A1P02452 MIR6758-201ENST00000620653 63 ntBASIC6.01□□□□□ -1.45
COL1A1P02452 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.01□□□□□ -1.45
COL1A1P02452 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL1A1P02452 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL1A1P02452 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL1A1P02452 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL1A1P02452 AC099654.2-201ENST00000433031 1980 ntBASIC6□□□□□ -1.45
COL1A1P02452 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6□□□□□ -1.45
COL1A1P02452 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6□□□□□ -1.45
COL1A1P02452 AC069213.2-201ENST00000420238 366 ntBASIC6□□□□□ -1.45
COL1A1P02452 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6□□□□□ -1.45
COL1A1P02452 OR2B7P-201ENST00000429302 934 ntBASIC6□□□□□ -1.45
COL1A1P02452 TXNP5-201ENST00000441043 315 ntBASIC6□□□□□ -1.45
COL1A1P02452 AL356390.1-201ENST00000455684 397 ntBASIC6□□□□□ -1.45
COL1A1P02452 AC091180.1-201ENST00000462104 372 ntBASIC6□□□□□ -1.45
COL1A1P02452 AC128716.1-201ENST00000475129 166 ntBASIC6□□□□□ -1.45
COL1A1P02452 AC116562.1-201ENST00000485355 781 ntBASIC6□□□□□ -1.45
COL1A1P02452 OR2A3P-201ENST00000493774 953 ntBASIC6□□□□□ -1.45
COL1A1P02452 IGBP1P5-201ENST00000507524 1000 ntBASIC6□□□□□ -1.45
COL1A1P02452 ENPP7P9-201ENST00000514456 627 ntBASIC6□□□□□ -1.45
COL1A1P02452 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6□□□□□ -1.45
COL1A1P02452 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6□□□□□ -1.45
COL1A1P02452 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6□□□□□ -1.45
COL1A1P02452 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6□□□□□ -1.45
COL1A1P02452 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6□□□□□ -1.45
COL1A1P02452 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6□□□□□ -1.45
COL1A1P02452 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6□□□□□ -1.45
COL1A1P02452 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6□□□□□ -1.45
COL1A1P02452 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL1A1P02452 ECM1P2-201ENST00000503354 1577 ntBASIC6□□□□□ -1.45
COL1A1P02452 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL1A1P02452 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL1A1P02452 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.99□□□□□ -1.45
COL1A1P02452 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL1A1P02452 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL1A1P02452 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL1A1P02452 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.99□□□□□ -1.45
COL1A1P02452 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC5.99□□□□□ -1.45
COL1A1P02452 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL1A1P02452 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.99□□□□□ -1.45
COL1A1P02452 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL1A1P02452 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
COL1A1P02452 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.99□□□□□ -1.45
COL1A1P02452 AL357515.1-201ENST00000402967 542 ntBASIC5.99□□□□□ -1.45
COL1A1P02452 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
COL1A1P02452 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.99□□□□□ -1.45
COL1A1P02452 TBCAP2-201ENST00000416175 326 ntBASIC5.99□□□□□ -1.45
COL1A1P02452 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.99□□□□□ -1.45
COL1A1P02452 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.99□□□□□ -1.45
COL1A1P02452 RPL10P17-201ENST00000453852 316 ntBASIC5.99□□□□□ -1.45
COL1A1P02452 AL356981.1-201ENST00000454879 684 ntBASIC5.99□□□□□ -1.45
COL1A1P02452 STRADBP1-201ENST00000478954 1281 ntBASIC5.99□□□□□ -1.45
COL1A1P02452 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.99□□□□□ -1.45
COL1A1P02452 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.99□□□□□ -1.45
COL1A1P02452 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.99□□□□□ -1.45
COL1A1P02452 AP001880.2-201ENST00000538233 448 ntBASIC5.99□□□□□ -1.45
COL1A1P02452 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.99□□□□□ -1.45
COL1A1P02452 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC5.99□□□□□ -1.45
COL1A1P02452 ATP5J2P6-201ENST00000565203 266 ntBASIC5.99□□□□□ -1.45
COL1A1P02452 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.99□□□□□ -1.45
COL1A1P02452 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL1A1P02452 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL1A1P02452 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
COL1A1P02452 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.99□□□□□ -1.45
COL1A1P02452 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.99□□□□□ -1.45
COL1A1P02452 AL132640.2-201ENST00000559968 1698 ntBASIC5.99□□□□□ -1.45
COL1A1P02452 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL1A1P02452 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL1A1P02452 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL1A1P02452 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL1A1P02452 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL1A1P02452 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
COL1A1P02452 RPS27AP7-201ENST00000422792 455 ntBASIC5.98□□□□□ -1.45
COL1A1P02452 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.98□□□□□ -1.45
COL1A1P02452 SCARNA22-201ENST00000503991 125 ntBASIC5.98□□□□□ -1.45
COL1A1P02452 AC016559.2-201ENST00000510759 359 ntBASIC5.98□□□□□ -1.45
COL1A1P02452 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.98□□□□□ -1.45
COL1A1P02452 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.98□□□□□ -1.45
COL1A1P02452 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.98□□□□□ -1.45
COL1A1P02452 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
COL1A1P02452 AL034374.2-201ENST00000605281 548 ntBASIC5.98□□□□□ -1.45
COL1A1P02452 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
COL1A1P02452 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL1A1P02452 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL1A1P02452 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL1A1P02452 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL1A1P02452 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL1A1P02452 AC004158.1-201ENST00000564508 4319 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms