Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL159169.2-201ENST00000610061 1269 ntBASIC3.87□□□□□ -1.79
HLA-DQA1P01909 MIR6809-201ENST00000612189 116 ntBASIC3.87□□□□□ -1.79
HLA-DQA1P01909 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA1P01909 CXADRP3-202ENST00000617265 1100 ntBASIC3.87□□□□□ -1.79
HLA-DQA1P01909 AC009237.17-201ENST00000618111 748 ntBASIC3.87□□□□□ -1.79
HLA-DQA1P01909 CCL14-204ENST00000622526 472 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DQA1P01909 AL390318.1-201ENST00000624564 687 ntBASIC3.87□□□□□ -1.79
HLA-DQA1P01909 AC022919.1-201ENST00000624979 626 ntBASIC3.87□□□□□ -1.79
HLA-DQA1P01909 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HLA-DQA1P01909 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA1P01909 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DQA1P01909 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA1P01909 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HLA-DQA1P01909 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DQA1P01909 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA1P01909 CASC19-206ENST00000641028 1430 ntBASIC3.87□□□□□ -1.79
HLA-DQA1P01909 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 RN7SKP104-201ENST00000362605 328 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 RNA5SP477-201ENST00000362639 119 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 AL672167.2-201ENST00000377164 879 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 VDAC2P1-201ENST00000399358 958 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 GAPDHP42-201ENST00000406848 981 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 PRUNEP1-201ENST00000425846 705 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 AL139148.1-201ENST00000427122 680 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 GAPDHP34-201ENST00000432112 823 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 NDUFS5P5-201ENST00000437256 321 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 AC091180.1-201ENST00000462104 372 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 RPS17P15-201ENST00000475609 349 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 AC005412.2-201ENST00000492004 341 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 EEF1A1P25-201ENST00000495704 1267 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 AC093890.1-201ENST00000502554 540 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 SNORA70.20-201ENST00000516848 126 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 AC060775.1-201ENST00000518241 520 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 GLRXP2-201ENST00000555594 321 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 AL121839.1-201ENST00000556233 1185 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 UBA2-208ENST00000592791 910 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 AL096712.1-201ENST00000614561 159 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 MTND5P23-201ENST00000430812 1655 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 OR51H2P-202ENST00000641424 3046 ntBASIC3.86□□□□□ -1.79
HLA-DQA1P01909 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
HLA-DQA1P01909 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC3.85□□□□□ -1.79
HLA-DQA1P01909 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
HLA-DQA1P01909 AC104118.1-201ENST00000607625 1589 ntBASIC3.85□□□□□ -1.79
HLA-DQA1P01909 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DQA1P01909 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
HLA-DQA1P01909 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DQA1P01909 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DQA1P01909 KARSP1-201ENST00000451871 1752 ntBASIC3.85□□□□□ -1.79
HLA-DQA1P01909 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.85□□□□□ -1.79
HLA-DQA1P01909 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HLA-DQA1P01909 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DQA1P01909 AC023490.2-201ENST00000359859 470 ntBASIC3.85□□□□□ -1.79
HLA-DQA1P01909 RNA5SP273-201ENST00000362484 113 ntBASIC3.85□□□□□ -1.79
HLA-DQA1P01909 RNA5SP28-201ENST00000363841 119 ntBASIC3.85□□□□□ -1.79
HLA-DQA1P01909 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC3.85□□□□□ -1.79
HLA-DQA1P01909 RNA5SP372-201ENST00000390836 115 ntBASIC3.85□□□□□ -1.79
HLA-DQA1P01909 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DQA1P01909 AL592291.1-201ENST00000403830 352 ntBASIC3.85□□□□□ -1.79
HLA-DQA1P01909 AL512422.1-201ENST00000407033 553 ntBASIC3.85□□□□□ -1.79
HLA-DQA1P01909 RMRPP5-201ENST00000411156 267 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms