Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
SHOX2O60902 CR788268.1-201ENST00000603931 1809 ntBASIC5.09□□□□□ -1.6
SHOX2O60902 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SHOX2O60902 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SHOX2O60902 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SHOX2O60902 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SHOX2O60902 CDY11P-201ENST00000447168 1651 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 SCARNA15-201ENST00000607520 4325 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHOX2O60902 MTCO1P22-201ENST00000604619 1360 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHOX2O60902 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SHOX2O60902 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHOX2O60902 EOGT-210ENST00000615922 1931 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHOX2O60902 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.08□□□□□ -1.6
SHOX2O60902 RNU1-108P-201ENST00000362556 161 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 U3.35-201ENST00000408405 208 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 CHEK2P5-201ENST00000423877 246 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 GTF2IP2-201ENST00000424290 697 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 AC127526.2-201ENST00000426436 775 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 PPIAP13-201ENST00000434706 478 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SHOX2O60902 AC004980.3-201ENST00000447046 365 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 OTX2P1-201ENST00000450956 354 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 ACA64.1-201ENST00000459171 127 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 FTH1P2-201ENST00000466086 412 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 AC104971.1-201ENST00000495117 578 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.08□□□□□ -1.6
SHOX2O60902 LSM3P4-201ENST00000502948 309 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.08□□□□□ -1.6
SHOX2O60902 OR51K1P-201ENST00000510214 950 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 AC006499.4-201ENST00000510947 694 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 HMGB1P42-201ENST00000532126 553 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.08□□□□□ -1.6
SHOX2O60902 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.08□□□□□ -1.6
SHOX2O60902 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.08□□□□□ -1.6
SHOX2O60902 AC092121.1-201ENST00000569452 202 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 AC010547.6-201ENST00000571789 193 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 AC012616.1-201ENST00000600294 197 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 AP005131.7-201ENST00000610087 611 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 AL118522.2-201ENST00000616045 615 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.08□□□□□ -1.6
SHOX2O60902 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.08□□□□□ -1.6
SHOX2O60902 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SHOX2O60902 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHOX2O60902 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHOX2O60902 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHOX2O60902 AC026523.2-201ENST00000625039 7739 ntBASIC5.08□□□□□ -1.6
SHOX2O60902 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHOX2O60902 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
SHOX2O60902 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SHOX2O60902 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 AC004386.1-201ENST00000393214 761 ntBASIC5.07□□□□□ -1.6
SHOX2O60902 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHOX2O60902 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SHOX2O60902 PDSS1P1-201ENST00000422953 1114 ntBASIC5.07□□□□□ -1.6
SHOX2O60902 AC113412.1-201ENST00000425840 504 ntBASIC5.07□□□□□ -1.6
SHOX2O60902 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.07□□□□□ -1.6
SHOX2O60902 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.07□□□□□ -1.6
SHOX2O60902 GSTM5P1-201ENST00000434751 660 ntBASIC5.07□□□□□ -1.6
SHOX2O60902 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 AL512637.1-201ENST00000439523 1231 ntBASIC5.07□□□□□ -1.6
SHOX2O60902 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.07□□□□□ -1.6
SHOX2O60902 HLA-DPA3-207ENST00000454398 229 ntBASIC5.07□□□□□ -1.6
SHOX2O60902 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHOX2O60902 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.07□□□□□ -1.6
SHOX2O60902 RN7SL517P-201ENST00000462240 305 ntBASIC5.07□□□□□ -1.6
SHOX2O60902 SCARNA16.4-201ENST00000516956 187 ntBASIC5.07□□□□□ -1.6
SHOX2O60902 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.07□□□□□ -1.6
SHOX2O60902 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.07□□□□□ -1.6
SHOX2O60902 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.07□□□□□ -1.6
SHOX2O60902 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.07□□□□□ -1.6
SHOX2O60902 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 MIR7154-201ENST00000620673 73 ntBASIC5.07□□□□□ -1.6
SHOX2O60902 AC087565.3-203ENST00000641018 837 ntBASIC5.07□□□□□ -1.6
SHOX2O60902 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
SHOX2O60902 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHOX2O60902 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.07□□□□□ -1.6
SHOX2O60902 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHOX2O60902 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.07□□□□□ -1.6
SHOX2O60902 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHOX2O60902 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHOX2O60902 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SHOX2O60902 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHOX2O60902 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms