Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MTND4P15-201ENST00000437913 1033 ntBASIC5.05□□□□□ -1.6
SNX3O60493 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.05□□□□□ -1.6
SNX3O60493 RPS19P6-201ENST00000441327 433 ntBASIC5.05□□□□□ -1.6
SNX3O60493 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
SNX3O60493 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.05□□□□□ -1.6
SNX3O60493 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.05□□□□□ -1.6
SNX3O60493 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.05□□□□□ -1.6
SNX3O60493 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.05□□□□□ -1.6
SNX3O60493 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.05□□□□□ -1.6
SNX3O60493 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.05□□□□□ -1.6
SNX3O60493 DEFB109F-201ENST00000491870 277 ntBASIC5.05□□□□□ -1.6
SNX3O60493 AC090543.1-201ENST00000492168 485 ntBASIC5.05□□□□□ -1.6
SNX3O60493 AC106822.1-201ENST00000502647 526 ntBASIC5.05□□□□□ -1.6
SNX3O60493 AC108157.1-201ENST00000510511 539 ntBASIC5.05□□□□□ -1.6
SNX3O60493 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.05□□□□□ -1.6
SNX3O60493 RNU6-615P-201ENST00000516065 106 ntBASIC5.05□□□□□ -1.6
SNX3O60493 RNU6-889P-201ENST00000517189 103 ntBASIC5.05□□□□□ -1.6
SNX3O60493 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.05□□□□□ -1.6
SNX3O60493 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.05□□□□□ -1.6
SNX3O60493 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.05□□□□□ -1.6
SNX3O60493 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.05□□□□□ -1.6
SNX3O60493 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.05□□□□□ -1.6
SNX3O60493 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.05□□□□□ -1.6
SNX3O60493 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.05□□□□□ -1.6
SNX3O60493 NDUFB4P11-201ENST00000560510 395 ntBASIC5.05□□□□□ -1.6
SNX3O60493 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.05□□□□□ -1.6
SNX3O60493 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.05□□□□□ -1.6
SNX3O60493 FAM106CP-201ENST00000582212 507 ntBASIC5.05□□□□□ -1.6
SNX3O60493 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.05□□□□□ -1.6
SNX3O60493 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNX3O60493 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNX3O60493 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.05□□□□□ -1.6
SNX3O60493 AC040174.2-201ENST00000602701 465 ntBASIC5.05□□□□□ -1.6
SNX3O60493 AC022001.1-201ENST00000605193 268 ntBASIC5.05□□□□□ -1.6
SNX3O60493 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.05□□□□□ -1.6
SNX3O60493 AL158062.1-201ENST00000619632 745 ntBASIC5.05□□□□□ -1.6
SNX3O60493 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.05□□□□□ -1.6
SNX3O60493 AC079298.2-201ENST00000623885 459 ntBASIC5.05□□□□□ -1.6
SNX3O60493 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.05□□□□□ -1.6
SNX3O60493 AC006453.5-201ENST00000636451 619 ntBASIC5.05□□□□□ -1.6
SNX3O60493 OR8G3P-202ENST00000641572 1255 ntBASIC5.05□□□□□ -1.6
SNX3O60493 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.05□□□□□ -1.6
SNX3O60493 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNX3O60493 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNX3O60493 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNX3O60493 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
SNX3O60493 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.05□□□□□ -1.6
SNX3O60493 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.05□□□□□ -1.6
SNX3O60493 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SNX3O60493 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNX3O60493 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.05□□□□□ -1.6
SNX3O60493 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX3O60493 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNX3O60493 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX3O60493 AC068446.1-201ENST00000556425 1549 ntBASIC5.04□□□□□ -1.6
SNX3O60493 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX3O60493 RNU1-146P-201ENST00000364015 165 ntBASIC5.04□□□□□ -1.6
SNX3O60493 RNA5SP279-201ENST00000365513 117 ntBASIC5.04□□□□□ -1.6
SNX3O60493 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX3O60493 HSPA8P15-201ENST00000401676 786 ntBASIC5.04□□□□□ -1.6
SNX3O60493 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX3O60493 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNX3O60493 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX3O60493 AL358176.3-201ENST00000420757 454 ntBASIC5.04□□□□□ -1.6
SNX3O60493 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX3O60493 EIF4HP2-201ENST00000424380 563 ntBASIC5.04□□□□□ -1.6
SNX3O60493 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX3O60493 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.04□□□□□ -1.6
SNX3O60493 AC007563.3-201ENST00000433233 371 ntBASIC5.04□□□□□ -1.6
SNX3O60493 NMNAT1P2-201ENST00000435192 860 ntBASIC5.04□□□□□ -1.6
SNX3O60493 PA2G4P1-201ENST00000442248 1197 ntBASIC5.04□□□□□ -1.6
SNX3O60493 AC005297.1-201ENST00000444765 862 ntBASIC5.04□□□□□ -1.6
SNX3O60493 AC007383.1-201ENST00000445875 636 ntBASIC5.04□□□□□ -1.6
SNX3O60493 AC104634.1-201ENST00000452720 462 ntBASIC5.04□□□□□ -1.6
SNX3O60493 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.04□□□□□ -1.6
SNX3O60493 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX3O60493 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX3O60493 RN7SL441P-201ENST00000492388 296 ntBASIC5.04□□□□□ -1.6
SNX3O60493 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.04□□□□□ -1.6
SNX3O60493 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.04□□□□□ -1.6
SNX3O60493 RPEP1-201ENST00000504507 658 ntBASIC5.04□□□□□ -1.6
SNX3O60493 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX3O60493 Y_RNA.667-201ENST00000516212 107 ntBASIC5.04□□□□□ -1.6
SNX3O60493 AC113191.1-201ENST00000517759 403 ntBASIC5.04□□□□□ -1.6
SNX3O60493 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX3O60493 OR8K2P-201ENST00000524645 927 ntBASIC5.04□□□□□ -1.6
SNX3O60493 CASP1P2-201ENST00000526830 1258 ntBASIC5.04□□□□□ -1.6
SNX3O60493 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
SNX3O60493 AC090022.1-201ENST00000546569 311 ntBASIC5.04□□□□□ -1.6
SNX3O60493 AL512310.9-201ENST00000553311 948 ntBASIC5.04□□□□□ -1.6
SNX3O60493 HMGN1P26-201ENST00000558737 303 ntBASIC5.04□□□□□ -1.6
SNX3O60493 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.04□□□□□ -1.6
SNX3O60493 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.04□□□□□ -1.6
SNX3O60493 CCDC58P1-201ENST00000578567 430 ntBASIC5.04□□□□□ -1.6
SNX3O60493 AP001496.3-201ENST00000580230 913 ntBASIC5.04□□□□□ -1.6
SNX3O60493 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX3O60493 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.04□□□□□ -1.6
SNX3O60493 AP002884.5-201ENST00000595053 1132 ntBASIC5.04□□□□□ -1.6
SNX3O60493 MIR6774-201ENST00000614651 70 ntBASIC5.04□□□□□ -1.6
SNX3O60493 uc_338.18-201ENST00000615451 175 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms