Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXA3O43365 RN7SL270P-201ENST00000579643 281 ntBASIC5.34□□□□□ -1.55
HOXA3O43365 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.34□□□□□ -1.55
HOXA3O43365 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.34□□□□□ -1.55
HOXA3O43365 AC008507.1-201ENST00000587506 734 ntBASIC5.34□□□□□ -1.55
HOXA3O43365 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXA3O43365 AC010463.3-201ENST00000594077 500 ntBASIC5.34□□□□□ -1.55
HOXA3O43365 AL499605.1-201ENST00000604628 403 ntBASIC5.34□□□□□ -1.55
HOXA3O43365 AL513218.1-201ENST00000606527 391 ntBASIC5.34□□□□□ -1.55
HOXA3O43365 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.34□□□□□ -1.55
HOXA3O43365 Z99129.1-201ENST00000612510 255 ntBASIC5.34□□□□□ -1.55
HOXA3O43365 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXA3O43365 AL353726.1-201ENST00000614041 1000 ntBASIC5.34□□□□□ -1.55
HOXA3O43365 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXA3O43365 AC003992.1-201ENST00000635364 557 ntBASIC5.34□□□□□ -1.55
HOXA3O43365 AC111152.1-202ENST00000635848 339 ntBASIC5.34□□□□□ -1.55
HOXA3O43365 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXA3O43365 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA3O43365 LINC01613-201ENST00000561476 2780 ntBASIC5.34□□□□□ -1.55
HOXA3O43365 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXA3O43365 AL669831.5-218ENST00000591702 1873 ntBASIC5.34□□□□□ -1.55
HOXA3O43365 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA3O43365 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXA3O43365 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.34□□□□□ -1.56
HOXA3O43365 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HOXA3O43365 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.56
HOXA3O43365 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HOXA3O43365 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HOXA3O43365 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA3O43365 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA3O43365 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA3O43365 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA3O43365 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA3O43365 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA3O43365 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HOXA3O43365 PABPC1P8-201ENST00000452851 2086 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 Z99496.1-201ENST00000469424 1477 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA3O43365 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA3O43365 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA3O43365 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA3O43365 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA3O43365 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA3O43365 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HOXA3O43365 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 SNORD35A-201ENST00000363389 86 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 RN7SKP237-201ENST00000364663 301 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 RNA5SP77-201ENST00000365394 120 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA3O43365 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA3O43365 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA3O43365 RN7SKP296-201ENST00000411185 341 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 AC007899.1-201ENST00000412776 775 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.33□□□□□ -1.56
HOXA3O43365 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXA3O43365 AL929472.1-201ENST00000417484 429 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 MRPS21P5-201ENST00000417885 231 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA3O43365 AC008072.1-201ENST00000434254 824 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.33□□□□□ -1.56
HOXA3O43365 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA3O43365 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA3O43365 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA3O43365 RPS7P7-201ENST00000463499 571 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 ACTG1P13-201ENST00000486987 1043 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 AC104685.1-201ENST00000502445 371 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA3O43365 MTND6P8-201ENST00000503471 522 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 AC112225.1-201ENST00000508230 297 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXA3O43365 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA3O43365 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXA3O43365 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXA3O43365 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXA3O43365 AC008126.1-201ENST00000549019 480 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXA3O43365 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA3O43365 AC026956.1-201ENST00000558741 396 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA3O43365 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.33□□□□□ -1.56
HOXA3O43365 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXA3O43365 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.33□□□□□ -1.56
HOXA3O43365 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXA3O43365 MTND1P15-201ENST00000579262 949 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.33□□□□□ -1.56
HOXA3O43365 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXA3O43365 MTCYBP22-201ENST00000603788 447 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 AC092354.1-201ENST00000606057 376 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXA3O43365 AC025588.4-201ENST00000615802 908 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 MIR6721-201ENST00000617181 87 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA3O43365 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXA3O43365 AP001052.1-201ENST00000626421 99 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXA3O43365 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXA3O43365 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXA3O43365 SAMMSON-209ENST00000641222 1100 ntBASIC5.33□□□□□ -1.56
HOXA3O43365 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA3O43365 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms