Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
TRIM38O00635 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
TRIM38O00635 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
TRIM38O00635 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM38O00635 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM38O00635 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM38O00635 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM38O00635 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TRIM38O00635 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM38O00635 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM38O00635 RNA5SP394-201ENST00000364216 119 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 RNA5SP132-201ENST00000364725 118 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM38O00635 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TRIM38O00635 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 RNA5SP498-201ENST00000411342 120 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 NMD3P2-201ENST00000421815 761 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 AL662874.1-201ENST00000426065 230 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM38O00635 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM38O00635 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM38O00635 MYO5BP2-201ENST00000449815 1277 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM38O00635 RSU1P1-201ENST00000453416 441 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM38O00635 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM38O00635 RPS20P4-201ENST00000461659 355 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM38O00635 AC037198.2-201ENST00000478845 733 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 AC012123.2-201ENST00000485809 248 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM38O00635 AC074087.1-201ENST00000512059 724 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 AC138701.1-201ENST00000524329 714 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 IGLV3-30-201ENST00000524362 298 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 HMGN2P36-201ENST00000529541 409 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.8□□□□□ -1.48
TRIM38O00635 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM38O00635 AC106730.2-201ENST00000566641 540 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 MIR4505-201ENST00000582238 73 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 OR7E18P-201ENST00000592589 702 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 SDR42E1P1-201ENST00000611327 477 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 AC011472.4-201ENST00000615848 491 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 MIR6719-201ENST00000622428 87 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TRIM38O00635 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM38O00635 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM38O00635 AL158152.1-201ENST00000602652 1435 ntBASIC5.8□□□□□ -1.48
TRIM38O00635 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM38O00635 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
TRIM38O00635 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM38O00635 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
TRIM38O00635 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM38O00635 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM38O00635 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM38O00635 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.79□□□□□ -1.48
TRIM38O00635 AP005432.1-201ENST00000580891 3485 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 AC093671.1-201ENST00000624981 2929 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM38O00635 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM38O00635 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TRIM38O00635 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
TRIM38O00635 AC007996.1-201ENST00000620414 2821 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM38O00635 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TRIM38O00635 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM38O00635 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM38O00635 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM38O00635 RN7SKP28-201ENST00000364770 305 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM38O00635 RNU6-354P-201ENST00000383862 107 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 RNU6-468P-201ENST00000384003 109 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 RNU6-610P-201ENST00000384264 107 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TRIM38O00635 HMGB3P19-201ENST00000403971 560 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 RN7SKP166-201ENST00000410812 305 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 MRPL53P1-201ENST00000414323 319 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 GTF2IP5-201ENST00000414608 731 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 VN1R37P-201ENST00000419096 748 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM38O00635 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM38O00635 AC099670.2-201ENST00000435130 321 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 Z80107.1-201ENST00000436830 412 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 CACYBPP1-201ENST00000438592 684 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 RPS7P3-201ENST00000443360 580 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 AC092106.1-201ENST00000444291 373 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 AC073909.1-201ENST00000447112 999 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 MTND1P31-201ENST00000449206 961 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 HMGB1P26-201ENST00000452520 628 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM38O00635 TPT1P3-201ENST00000492841 512 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM38O00635 OR5H3P-201ENST00000502817 919 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 NENFP3-201ENST00000503735 313 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM38O00635 AC111000.6-201ENST00000514471 709 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 HIGD1AP18-201ENST00000520730 278 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 AP000916.1-201ENST00000533869 835 ntBASIC5.79□□□□□ -1.48
TRIM38O00635 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM38O00635 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM38O00635 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms