Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.94□□□□□ -1.62
NPIPA3F8WFD2 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.94□□□□□ -1.62
NPIPA3F8WFD2 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.94□□□□□ -1.62
NPIPA3F8WFD2 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
NPIPA3F8WFD2 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
NPIPA3F8WFD2 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
NPIPA3F8WFD2 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AL022322.2-201ENST00000624072 20397 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 MIR133B-201ENST00000362210 119 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 RNA5SP183-201ENST00000362452 119 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 RNA5SP507-201ENST00000363603 121 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 CCNB2P1-201ENST00000399411 1150 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AL133388.1-201ENST00000404509 287 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 MTND4LP13-201ENST00000425022 298 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 VTI1BP4-201ENST00000427516 527 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AC046176.1-201ENST00000435260 1170 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AC245047.2-201ENST00000441060 530 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AL627224.1-201ENST00000448334 444 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 NPM1P28-201ENST00000492269 840 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AC016550.3-201ENST00000515706 767 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 HMGB1P40-201ENST00000525121 540 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 OR4A17P-201ENST00000526032 904 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AC005520.3-201ENST00000602874 370 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AC005021.1-201ENST00000608730 355 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AC019131.2-201ENST00000609071 870 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 AC074101.1-201ENST00000637861 241 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NPIPA3F8WFD2 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 AC079097.1-201ENST00000512187 1399 ntBASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 RPL23P2-201ENST00000320371 421 ntBASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 RN7SKP185-201ENST00000362813 326 ntBASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 SNORA67-201ENST00000384423 137 ntBASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 RN7SKP273-201ENST00000411392 314 ntBASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 RPSAP35-201ENST00000413753 818 ntBASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 AC006065.1-201ENST00000422539 802 ntBASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 AC007161.1-204ENST00000423039 460 ntBASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 FAR1P1-201ENST00000427163 934 ntBASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 NPM1P22-201ENST00000427761 952 ntBASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.92□□□□□ -1.62
NPIPA3F8WFD2 AL606490.7-201ENST00000433136 191 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms