Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AC139103.1-201ENST00000534696 1030 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AC009237.13-201ENST00000603193 276 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AC079610.2-201ENST00000604818 690 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AC006946.3-201ENST00000609791 756 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AC004023.1-201ENST00000561473 1744 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 OR10J6P-201ENST00000289731 930 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 RNA5SP429-201ENST00000363688 109 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 RNA5SP485-201ENST00000365053 119 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AC007618.1-201ENST00000366455 732 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 HNRNPDP2-201ENST00000406475 478 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AP000357.1-201ENST00000409926 1165 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 RN7SKP286-201ENST00000410894 299 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 RNU2-6P-201ENST00000411404 190 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AL450992.3-201ENST00000413192 568 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AC016772.1-201ENST00000444170 1261 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 IGBP1P3-201ENST00000447449 1000 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AC090804.1-201ENST00000448870 490 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AL935212.3-201ENST00000450729 284 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 RBMY2EP-202ENST00000456360 940 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AC096992.1-201ENST00000459808 709 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 RN7SL39P-201ENST00000462264 297 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 RPL5P30-201ENST00000465511 891 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AC021106.1-201ENST00000509020 1058 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 CR383658.1-201ENST00000514609 734 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AP005119.2-201ENST00000579735 1105 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 RN7SL311P-201ENST00000579858 306 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 MIR4472-2-201ENST00000582069 67 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 PRPF19P1-201ENST00000584766 898 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AC113194.1-201ENST00000606037 500 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 AC007529.1-201ENST00000418574 2178 ntBASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HMGB1P1B2RPK0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AC068870.1-201ENST00000563737 2455 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 HSPA8P18-201ENST00000439846 1928 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 TMSB4XP2-201ENST00000335179 210 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 RPL21P67-201ENST00000402896 478 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 ATF1P1-201ENST00000406040 927 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 MIR1231-201ENST00000408101 92 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AL357078.2-201ENST00000416486 427 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 RWDD4P2-201ENST00000426392 563 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 DEFA9P-201ENST00000433042 285 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 GAPDHP59-201ENST00000435908 267 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AC239800.1-201ENST00000442049 719 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 RPS7P4-201ENST00000444127 582 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 RPS27P5-201ENST00000444247 244 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AL590004.3-202ENST00000445883 451 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AL500527.1-201ENST00000448532 255 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AC245028.2-201ENST00000458673 253 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 RPS12P20-201ENST00000464109 380 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms