Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 AC010487.1-201ENST00000594408 1172 ntBASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 AC005377.1-201ENST00000605126 456 ntBASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 AL512329.2-201ENST00000607350 548 ntBASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 AL049794.2-201ENST00000616301 365 ntBASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 AC019206.1-201ENST00000621938 425 ntBASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 AC068870.3-201ENST00000625077 2536 ntBASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 ECM1P2-201ENST00000503354 1577 ntBASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRAV27A0A087WT01 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
TRAV27A0A087WT01 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
TRAV27A0A087WT01 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
TRAV27A0A087WT01 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.46□□□□□ -1.69
TRAV27A0A087WT01 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.46□□□□□ -1.69
TRAV27A0A087WT01 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 OOSP1-201ENST00000398992 1270 ntBASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 SNORA11.5-201ENST00000408163 128 ntBASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 TMBIM7P-201ENST00000418074 855 ntBASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 RPS26P4-201ENST00000431743 355 ntBASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 AC092162.1-201ENST00000432828 434 ntBASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 KNOP1P3-201ENST00000446933 426 ntBASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 AL161722.1-201ENST00000446972 1032 ntBASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 AL606490.1-201ENST00000452266 765 ntBASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 AL389915.2-201ENST00000454576 441 ntBASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 AC097484.1-201ENST00000471148 389 ntBASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 HMGN2P25-201ENST00000486956 268 ntBASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 AC026688.1-201ENST00000520639 1168 ntBASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 NMNAT1P1-201ENST00000554095 876 ntBASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 AC087821.1-201ENST00000623639 567 ntBASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.46□□□□□ -1.7
TRAV27A0A087WT01 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 NXF4-202ENST00000416098 1465 ntBASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 AL512422.1-201ENST00000407033 553 ntBASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 DDX39BP1-205ENST00000422507 192 ntBASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 RGS17P1-201ENST00000423358 553 ntBASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 MGAT2P2-201ENST00000427194 797 ntBASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 OR7E125P-201ENST00000443450 846 ntBASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 RHEBP2-201ENST00000450289 600 ntBASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 RN7SL101P-201ENST00000496350 279 ntBASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 AC072052.1-201ENST00000496556 306 ntBASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 COX6B1P5-201ENST00000509843 249 ntBASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 MIR3936-201ENST00000584304 110 ntBASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 OR51C1P-201ENST00000608504 942 ntBASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRAV27A0A087WT01 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms