Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 AC006272.2-201ENST00000594725 163 ntBASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 AC107308.1-201ENST00000615897 301 ntBASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 AC010435.1-201ENST00000623353 1177 ntBASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 AC119674.1-220ENST00000641502 1048 ntBASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 MFSD8-239ENST00000641590 2479 ntBASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA1Q9Y5H4 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 SNORA56-201ENST00000383966 129 ntBASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 RNU1-149P-201ENST00000390870 161 ntBASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 RNA5SP487-201ENST00000410186 122 ntBASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 AC092651.1-201ENST00000426110 312 ntBASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 RPL5P2-201ENST00000429598 854 ntBASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 RPS3AP38-201ENST00000435889 763 ntBASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 AL672138.1-201ENST00000450604 1015 ntBASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 CBX1P2-201ENST00000453841 458 ntBASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 AC108751.3-201ENST00000461814 1020 ntBASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 BX284632.1-201ENST00000478218 541 ntBASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 OR51K1P-201ENST00000510214 950 ntBASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 SCARNA16.4-201ENST00000516956 187 ntBASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 AC092490.3-201ENST00000545370 572 ntBASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 AC109583.2-201ENST00000617367 129 ntBASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 AC000095.2-202ENST00000637415 154 ntBASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PCDHGA1Q9Y5H4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 AC022164.1-201ENST00000568767 2673 ntBASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 AC083799.1-201ENST00000366451 910 ntBASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 VDAC2P1-201ENST00000399358 958 ntBASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 SRSF1P1-201ENST00000424058 520 ntBASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 AC092017.2-201ENST00000427600 362 ntBASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 MTCYBP29-201ENST00000436327 1006 ntBASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 PA2G4P6-201ENST00000438325 1197 ntBASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 AL596266.1-201ENST00000448132 400 ntBASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 AC093890.1-201ENST00000502554 540 ntBASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 RNU6-941P-201ENST00000516346 108 ntBASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 PMS2P3-207ENST00000529061 717 ntBASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA1Q9Y5H4 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 211.1 ms