Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 AC008115.4-201ENST00000619780 775 ntBASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SSX2IPQ9Y2D8 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 TCP1P3-201ENST00000414406 1498 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 RAB9AP4-201ENST00000415230 609 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 VN1R31P-201ENST00000417498 730 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 MTND4LP13-201ENST00000425022 298 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 AL606490.7-201ENST00000433136 191 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 AL390119.1-201ENST00000440329 312 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 TPTE2P3-201ENST00000441562 1189 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 OR7E116P-201ENST00000448529 957 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 snoU109.3-201ENST00000459477 145 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 RN7SL51P-201ENST00000468230 285 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 AC104629.2-201ENST00000468627 598 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 RPS3AP6-201ENST00000484430 795 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 RN7SL547P-201ENST00000490793 290 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 PRELID3BP6-201ENST00000503839 571 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 AK4P6-201ENST00000505168 528 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 HMGB1P46-201ENST00000520062 610 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 AC106730.2-201ENST00000566641 540 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 AC006946.3-201ENST00000609791 756 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 AL355974.3-201ENST00000617383 467 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 MIR6730-201ENST00000622213 67 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 MIR6719-201ENST00000622428 87 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 SAMMSON-227ENST00000642114 1199 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 AC005005.4-201ENST00000623789 16698 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 AL359955.1-201ENST00000455242 3275 ntBASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX2IPQ9Y2D8 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AC144833.1-201ENST00000567953 4089 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 SPTLC1P2-201ENST00000407089 121 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 NIFKP3-201ENST00000417799 865 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AC013262.1-201ENST00000426710 252 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 RAB9AP5-201ENST00000437794 597 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 RAB9AP2-201ENST00000443911 597 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AC011225.1-201ENST00000457751 369 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 RPS23P2-201ENST00000463671 415 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 RN7SL610P-201ENST00000463845 291 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AC068587.2-201ENST00000478386 781 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 NPM1P29-201ENST00000483112 803 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 RPL38P3-201ENST00000484463 213 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AC002456.2-201ENST00000509356 380 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AC016550.3-201ENST00000515706 767 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 RNU5A-7P-201ENST00000515979 116 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 Y_RNA.717-201ENST00000517106 92 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 OR10G5P-201ENST00000532733 358 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 ZKSCAN7P1-201ENST00000543668 673 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AC139697.1-201ENST00000548429 745 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AL049779.3-201ENST00000557141 606 ntBASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC6.09□□□□□ -1.43
SSX2IPQ9Y2D8 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms