Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 VN1R54P-201ENST00000435210 1049 ntBASIC5.35□□□□□ -1.55
TRIM4Q9C037 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 TAAR4P-201ENST00000454843 1039 ntBASIC5.35□□□□□ -1.55
TRIM4Q9C037 SNORD125-201ENST00000459538 96 ntBASIC5.35□□□□□ -1.55
TRIM4Q9C037 RN7SL97P-201ENST00000486780 299 ntBASIC5.35□□□□□ -1.55
TRIM4Q9C037 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 RN7SKP253-201ENST00000516424 309 ntBASIC5.35□□□□□ -1.55
TRIM4Q9C037 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM4Q9C037 DPPA2P4-201ENST00000563717 878 ntBASIC5.35□□□□□ -1.55
TRIM4Q9C037 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 AC022106.2-201ENST00000620114 757 ntBASIC5.35□□□□□ -1.55
TRIM4Q9C037 AC007683.2-201ENST00000624681 714 ntBASIC5.35□□□□□ -1.55
TRIM4Q9C037 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM4Q9C037 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM4Q9C037 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM4Q9C037 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM4Q9C037 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM4Q9C037 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC068870.1-201ENST00000563737 2455 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM4Q9C037 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM4Q9C037 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM4Q9C037 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC017079.1-201ENST00000333650 415 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 SETP10-201ENST00000424368 814 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 AL157385.1-201ENST00000446973 268 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC002553.2-201ENST00000453217 340 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC091153.1-201ENST00000466297 402 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 RPL7P6-201ENST00000480903 738 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 RN7SL570P-201ENST00000484405 292 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 RPL32P33-201ENST00000487023 394 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC074255.1-201ENST00000511259 501 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC021678.3-201ENST00000517893 476 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 PRPF19P1-201ENST00000584766 898 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC063977.5-201ENST00000601044 974 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 AL139124.1-201ENST00000609123 421 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 AL445528.2-201ENST00000620582 470 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC015871.5-202ENST00000623252 701 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 AP002505.2-201ENST00000623585 696 ntBASIC5.34□□□□□ -1.55
TRIM4Q9C037 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM4Q9C037 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM4Q9C037 AC100778.3-201ENST00000580060 1750 ntBASIC5.34□□□□□ -1.56
TRIM4Q9C037 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TRIM4Q9C037 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
TRIM4Q9C037 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.34□□□□□ -1.56
TRIM4Q9C037 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 MRE11P1-201ENST00000464884 2127 ntBASIC5.33□□□□□ -1.56
TRIM4Q9C037 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM4Q9C037 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM4Q9C037 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM4Q9C037 RNA5SP30-201ENST00000365552 115 ntBASIC5.33□□□□□ -1.56
TRIM4Q9C037 RNU1-77P-201ENST00000390868 162 ntBASIC5.33□□□□□ -1.56
TRIM4Q9C037 AL356967.1-201ENST00000406305 431 ntBASIC5.33□□□□□ -1.56
TRIM4Q9C037 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 CYCSP6-201ENST00000434498 302 ntBASIC5.33□□□□□ -1.56
TRIM4Q9C037 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 LINC02210-201ENST00000444561 288 ntBASIC5.33□□□□□ -1.56
TRIM4Q9C037 AC005297.1-201ENST00000444765 862 ntBASIC5.33□□□□□ -1.56
TRIM4Q9C037 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM4Q9C037 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 AC022882.1-201ENST00000532142 501 ntBASIC5.33□□□□□ -1.56
TRIM4Q9C037 AC024940.3-201ENST00000538551 316 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms