Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC017078.1-201ENST00000416146 368 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 NENFP1-201ENST00000419476 466 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC007562.1-201ENST00000421819 517 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AL139158.1-201ENST00000424719 340 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AL353898.1-201ENST00000444055 238 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC023274.2-201ENST00000445264 521 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 TIMM8BP2-201ENST00000445940 251 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 TPMTP4-201ENST00000450749 678 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 RN7SL221P-201ENST00000466190 281 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 SLC25A51P1-201ENST00000468432 871 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC099340.1-201ENST00000475247 599 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 SNORA81.2-201ENST00000516868 170 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC090826.1-203ENST00000569235 490 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 ISCA1P3-201ENST00000577104 373 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC245052.7-201ENST00000601161 359 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC125494.3-201ENST00000602759 455 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC079089.3-201ENST00000603094 673 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC100767.2-201ENST00000604840 693 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AL392112.1-201ENST00000605115 829 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AL138960.1-201ENST00000613838 513 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC121761.2-201ENST00000617300 689 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 IMMTP1-201ENST00000435590 2219 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 AC023245.2-201ENST00000530760 2978 ntBASIC6.59□□□□□ -1.35
FOXP3Q9BZS1 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
FOXP3Q9BZS1 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.59□□□□□ -1.36
FOXP3Q9BZS1 ANKRD36BP1-202ENST00000604892 1417 ntBASIC6.59□□□□□ -1.36
FOXP3Q9BZS1 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC007159.1-201ENST00000566529 4706 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AL121835.1-201ENST00000404250 354 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 RPL12P23-201ENST00000405880 490 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AL590635.1-201ENST00000406314 586 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC105402.1-201ENST00000413336 545 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 DPRXP1-201ENST00000426312 460 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 GAPDHP37-201ENST00000442317 968 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 UBBP5-201ENST00000446970 266 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 OR52E3P-201ENST00000452083 936 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC011825.1-201ENST00000484967 388 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC022415.1-202ENST00000486612 523 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 RPS6P4-201ENST00000494693 758 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 DSTNP2-201ENST00000504533 515 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 NAP1L1P1-201ENST00000524793 1063 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC244502.2-201ENST00000543361 851 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC009729.1-201ENST00000548873 1133 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 CCNG2P1-201ENST00000549521 1000 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC005519.1-201ENST00000554490 601 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC087481.2-201ENST00000565492 330 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms