Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 PPIAP6-201ENST00000557078 499 ntBASIC6.51□□□□□ -1.37
TRIM55Q9BYV6 AC090888.3-201ENST00000558917 509 ntBASIC6.51□□□□□ -1.37
TRIM55Q9BYV6 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM55Q9BYV6 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.51□□□□□ -1.37
TRIM55Q9BYV6 MIR4675-201ENST00000577898 77 ntBASIC6.51□□□□□ -1.37
TRIM55Q9BYV6 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM55Q9BYV6 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM55Q9BYV6 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.51□□□□□ -1.37
TRIM55Q9BYV6 AL583832.1-201ENST00000603227 784 ntBASIC6.51□□□□□ -1.37
TRIM55Q9BYV6 AL163642.2-201ENST00000604722 1019 ntBASIC6.51□□□□□ -1.37
TRIM55Q9BYV6 AC122108.2-201ENST00000611946 526 ntBASIC6.51□□□□□ -1.37
TRIM55Q9BYV6 AC011939.3-201ENST00000613686 466 ntBASIC6.51□□□□□ -1.37
TRIM55Q9BYV6 SNORA16A-202ENST00000628458 135 ntBASIC6.51□□□□□ -1.37
TRIM55Q9BYV6 AC027559.1-201ENST00000636288 271 ntBASIC6.51□□□□□ -1.37
TRIM55Q9BYV6 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
TRIM55Q9BYV6 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
TRIM55Q9BYV6 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM55Q9BYV6 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM55Q9BYV6 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 ZNF542P-204ENST00000482727 1305 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 DNM1P47-203ENST00000571780 12667 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 AC068870.3-201ENST00000625077 2536 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 HSPA8P17-201ENST00000427029 1382 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 IL6STP1-201ENST00000346911 1020 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 RNU1-5P-201ENST00000362684 144 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 RN7SKP250-201ENST00000363924 321 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 RNU1-59P-201ENST00000364829 162 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 AC026310.1-201ENST00000396004 378 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 CDC42P6-201ENST00000421246 576 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 AC073069.1-201ENST00000428657 441 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 AL031663.1-201ENST00000437445 219 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 AC093155.1-201ENST00000440164 826 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 COX6CP18-201ENST00000448769 222 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 MTND2P28-201ENST00000457540 1044 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 RPL31P3-201ENST00000458430 332 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 RN7SL390P-201ENST00000470634 284 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 RPL23AP71-201ENST00000470966 469 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 PPP1R11P1-201ENST00000486095 376 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 OR7E157P-201ENST00000494376 911 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 AC109445.1-201ENST00000512356 383 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 AC117532.1-201ENST00000514638 323 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 AC116553.2-201ENST00000564203 463 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 MIR4999-201ENST00000585029 91 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 NTAN1P1-201ENST00000603150 646 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 OR2AS2P-201ENST00000606902 342 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 AC131235.4-201ENST00000609288 620 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 U1.25-201ENST00000614085 162 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 AL031658.2-201ENST00000616850 651 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 AC005702.3-201ENST00000585345 1447 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 AC109315.1-201ENST00000584143 1347 ntBASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM55Q9BYV6 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 Z99496.1-201ENST00000469424 1477 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AL731532.1-201ENST00000623972 4236 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AL161912.4-201ENST00000623889 2468 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms