Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RPL10P7-201ENST00000495649 625 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 SUMO2P17-201ENST00000504438 285 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC006499.5-201ENST00000505037 514 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 DUTP7-201ENST00000507982 486 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC112206.3-201ENST00000514578 389 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RN7SKP242-201ENST00000515967 289 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RNA5SP303-201ENST00000516192 130 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 Y_RNA.673-201ENST00000516306 88 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RNU2-31P-201ENST00000516954 155 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RNA5SP101-201ENST00000517036 108 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 HIGD1AP18-201ENST00000520730 278 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 IGKV2-29-201ENST00000521304 372 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC090281.1-201ENST00000523019 276 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 OR5M7P-201ENST00000526140 972 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 MIR4800-201ENST00000537353 80 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 DCN-210ENST00000547568 823 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC079598.4-201ENST00000549647 265 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 SETP7-201ENST00000552169 453 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 COX6CP11-201ENST00000555293 229 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 FAM30C-201ENST00000561158 410 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC116553.2-201ENST00000564203 463 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC138749.2-201ENST00000566048 167 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RPS7P1-201ENST00000571702 585 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC005726.4-201ENST00000582858 458 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC015688.2-201ENST00000584523 262 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AL596327.1-201ENST00000603629 213 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC005070.1-201ENST00000603744 365 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC005070.2-201ENST00000604391 260 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC018714.1-201ENST00000605028 208 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC138473.1-201ENST00000605717 526 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 MIR6883-201ENST00000614952 78 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 uc_338.21-201ENST00000622458 147 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
KRTAP4-3Q9BYR4 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
KRTAP4-3Q9BYR4 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
KRTAP4-3Q9BYR4 ZNF665-201ENST00000396424 4159 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2.01
KRTAP4-3Q9BYR4 ATM-215ENST00000530958 5718 ntTSL 2 BASIC2.53□□□□□ -2.01
KRTAP4-3Q9BYR4 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
KRTAP4-3Q9BYR4 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2.01
KRTAP4-3Q9BYR4 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms